Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.95□□□□□ -0.02
RPA3P35244 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RPA3P35244 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RPA3P35244 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RPA3P35244 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 AC111170.3-201ENST00000624282 2464 ntBASIC14.94□□□□□ -0.02
RPA3P35244 AC093525.8-201ENST00000624099 1342 ntBASIC14.94□□□□□ -0.02
RPA3P35244 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RPA3P35244 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 DRD5P1-201ENST00000456605 1438 ntBASIC14.94□□□□□ -0.02
RPA3P35244 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.94□□□□□ -0.02
RPA3P35244 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 AL442647.2-201ENST00000429864 857 ntBASIC14.94□□□□□ -0.02
RPA3P35244 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.94□□□□□ -0.02
RPA3P35244 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.94□□□□□ -0.02
RPA3P35244 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.94□□□□□ -0.02
RPA3P35244 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.94□□□□□ -0.02
RPA3P35244 ELK1P1-201ENST00000485699 580 ntBASIC14.94□□□□□ -0.02
RPA3P35244 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.94□□□□□ -0.02
RPA3P35244 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.94□□□□□ -0.02
RPA3P35244 SPDYE22P-201ENST00000582158 798 ntBASIC14.94□□□□□ -0.02
RPA3P35244 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 AC133539.2-201ENST00000604757 467 ntBASIC14.94□□□□□ -0.02
RPA3P35244 AC107373.2-201ENST00000607735 490 ntBASIC14.94□□□□□ -0.02
RPA3P35244 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.94□□□□□ -0.02
RPA3P35244 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RPA3P35244 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.94□□□□□ -0.02
RPA3P35244 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.94□□□□□ -0.02
RPA3P35244 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
RPA3P35244 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RPA3P35244 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.94□□□□□ -0.02
RPA3P35244 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RPA3P35244 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.94□□□□□ -0.02
RPA3P35244 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.93□□□□□ -0.02
RPA3P35244 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.93□□□□□ -0.02
RPA3P35244 SOCS2P1-201ENST00000417727 557 ntBASIC14.93□□□□□ -0.02
RPA3P35244 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
RPA3P35244 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 AC026410.3-201ENST00000514280 936 ntBASIC14.93□□□□□ -0.02
RPA3P35244 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.93□□□□□ -0.02
RPA3P35244 WASH4P-201ENST00000564273 1246 ntBASIC14.93□□□□□ -0.02
RPA3P35244 AC120045.2-201ENST00000567334 178 ntBASIC14.93□□□□□ -0.02
RPA3P35244 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RPA3P35244 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.93□□□□□ -0.02
RPA3P35244 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 AL356585.2-201ENST00000625078 2396 ntBASIC14.93□□□□□ -0.02
RPA3P35244 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RPA3P35244 MYADML-201ENST00000474610 2147 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms