Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.87■□□□□ 0.45
TM4SF1P30408 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 VENTXP4-201ENST00000449029 958 ntBASIC17.87■□□□□ 0.45
TM4SF1P30408 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.87■□□□□ 0.45
TM4SF1P30408 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF1P30408 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.87■□□□□ 0.45
TM4SF1P30408 AL359091.4-201ENST00000610052 409 ntBASIC17.87■□□□□ 0.45
TM4SF1P30408 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF1P30408 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF1P30408 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF1P30408 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TM4SF1P30408 ODCP-201ENST00000459650 1639 ntBASIC17.87■□□□□ 0.45
TM4SF1P30408 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF1P30408 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TM4SF1P30408 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.86■□□□□ 0.45
TM4SF1P30408 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TM4SF1P30408 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TM4SF1P30408 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.86■□□□□ 0.45
TM4SF1P30408 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.86■□□□□ 0.45
TM4SF1P30408 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.86■□□□□ 0.45
TM4SF1P30408 KRT18P37-201ENST00000520711 1282 ntBASIC17.86■□□□□ 0.45
TM4SF1P30408 SORD2P-201ENST00000558556 1069 ntBASIC17.86■□□□□ 0.45
TM4SF1P30408 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 MME-218ENST00000625667 363 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF1P30408 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
TM4SF1P30408 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF1P30408 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF1P30408 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 AGAP7P-201ENST00000582299 2062 ntBASIC17.86■□□□□ 0.45
TM4SF1P30408 AGAP14-201ENST00000624701 2060 ntBASIC17.86■□□□□ 0.45
TM4SF1P30408 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.86■□□□□ 0.45
TM4SF1P30408 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF1P30408 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.86■□□□□ 0.45
TM4SF1P30408 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TM4SF1P30408 PTGER4P2-201ENST00000328411 252 ntBASIC17.85■□□□□ 0.45
TM4SF1P30408 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TM4SF1P30408 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TM4SF1P30408 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.85■□□□□ 0.45
TM4SF1P30408 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TM4SF1P30408 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.85■□□□□ 0.45
TM4SF1P30408 KRT8P18-201ENST00000413425 1445 ntBASIC17.85■□□□□ 0.45
TM4SF1P30408 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 AL109809.1-201ENST00000418979 1367 ntBASIC17.85■□□□□ 0.45
TM4SF1P30408 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TM4SF1P30408 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.85■□□□□ 0.45
TM4SF1P30408 PTGER4P3-201ENST00000458150 252 ntBASIC17.85■□□□□ 0.45
TM4SF1P30408 VENTXP3-201ENST00000546480 773 ntBASIC17.85■□□□□ 0.45
TM4SF1P30408 AL132994.1-201ENST00000554098 400 ntBASIC17.85■□□□□ 0.45
TM4SF1P30408 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.85■□□□□ 0.45
TM4SF1P30408 MIR4265-201ENST00000582152 99 ntBASIC17.85■□□□□ 0.45
TM4SF1P30408 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.85■□□□□ 0.45
TM4SF1P30408 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.85■□□□□ 0.45
TM4SF1P30408 AC013268.4-201ENST00000637413 2228 ntBASIC17.85■□□□□ 0.45
TM4SF1P30408 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.85■□□□□ 0.45
TM4SF1P30408 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TM4SF1P30408 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TM4SF1P30408 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF1P30408 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.84■□□□□ 0.45
TM4SF1P30408 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.84■□□□□ 0.45
TM4SF1P30408 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF1P30408 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TM4SF1P30408 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 517 ms