Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 AC130686.1-201ENST00000622936 2466 ntBASIC14□□□□□ -0.17
PTPN6P29350 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14□□□□□ -0.17
PTPN6P29350 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PTPN6P29350 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PTPN6P29350 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.99□□□□□ -0.17
PTPN6P29350 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PTPN6P29350 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.99□□□□□ -0.17
PTPN6P29350 HSPA8P5-201ENST00000456928 2069 ntBASIC13.99□□□□□ -0.17
PTPN6P29350 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 OR8S1-201ENST00000310194 1080 ntBASIC13.99□□□□□ -0.17
PTPN6P29350 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.99□□□□□ -0.17
PTPN6P29350 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.99□□□□□ -0.17
PTPN6P29350 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 AC112492.5-201ENST00000421897 457 ntBASIC13.99□□□□□ -0.17
PTPN6P29350 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.99□□□□□ -0.17
PTPN6P29350 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.99□□□□□ -0.17
PTPN6P29350 AC012441.1-201ENST00000446669 685 ntBASIC13.99□□□□□ -0.17
PTPN6P29350 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 GPR53P-205ENST00000457298 1084 ntBASIC13.99□□□□□ -0.17
PTPN6P29350 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 AC022137.2-201ENST00000503482 481 ntBASIC13.99□□□□□ -0.17
PTPN6P29350 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.99□□□□□ -0.17
PTPN6P29350 KRT17P8-201ENST00000540749 863 ntBASIC13.99□□□□□ -0.17
PTPN6P29350 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.99□□□□□ -0.17
PTPN6P29350 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 MYO15B-237ENST00000642007 4893 ntBASIC13.99□□□□□ -0.17
PTPN6P29350 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 AC023794.5-201ENST00000564380 2157 ntBASIC13.99□□□□□ -0.17
PTPN6P29350 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.99□□□□□ -0.17
PTPN6P29350 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PTPN6P29350 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PTPN6P29350 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTPN6P29350 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 AC105206.1-202ENST00000314927 2368 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 MSTO2P-201ENST00000314835 1709 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 AC015688.4-201ENST00000580780 1647 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 AC134312.5-201ENST00000568031 1313 ntBASIC13.98□□□□□ -0.17
PTPN6P29350 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
PTPN6P29350 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.98□□□□□ -0.17
PTPN6P29350 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PTPN6P29350 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PTPN6P29350 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms