Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CTGFP29279 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTGFP29279 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CTGFP29279 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CTGFP29279 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.17■□□□□ 0.18
CTGFP29279 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTGFP29279 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTGFP29279 CCT8L1P-201ENST00000465400 1674 ntBASIC16.17■□□□□ 0.18
CTGFP29279 OR6D1P-202ENST00000641007 5290 ntBASIC16.17■□□□□ 0.18
CTGFP29279 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CTGFP29279 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.17■□□□□ 0.18
CTGFP29279 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTGFP29279 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTGFP29279 LINC00115-201ENST00000473798 1317 ntBASIC16.17■□□□□ 0.18
CTGFP29279 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.17■□□□□ 0.18
CTGFP29279 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CTGFP29279 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.17■□□□□ 0.18
CTGFP29279 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 DOC2GP-204ENST00000639052 2548 ntBASIC16.16■□□□□ 0.18
CTGFP29279 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CTGFP29279 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.16■□□□□ 0.18
CTGFP29279 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTGFP29279 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CTGFP29279 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC16.16■□□□□ 0.18
CTGFP29279 IFNWP2-201ENST00000431203 580 ntBASIC16.16■□□□□ 0.18
CTGFP29279 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.16■□□□□ 0.18
CTGFP29279 RN7SL128P-201ENST00000467883 305 ntBASIC16.16■□□□□ 0.18
CTGFP29279 RPS18P9-201ENST00000482817 460 ntBASIC16.16■□□□□ 0.18
CTGFP29279 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.16■□□□□ 0.18
CTGFP29279 BCRP4-201ENST00000506079 804 ntBASIC16.16■□□□□ 0.18
CTGFP29279 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC16.16■□□□□ 0.18
CTGFP29279 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC16.16■□□□□ 0.18
CTGFP29279 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CTGFP29279 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.16■□□□□ 0.18
CTGFP29279 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC16.16■□□□□ 0.18
CTGFP29279 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.16■□□□□ 0.18
CTGFP29279 AC005274.1-201ENST00000623460 802 ntBASIC16.16■□□□□ 0.18
CTGFP29279 AC139713.2-207ENST00000641556 1292 ntBASIC16.16■□□□□ 0.18
CTGFP29279 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.16■□□□□ 0.18
CTGFP29279 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.16■□□□□ 0.18
CTGFP29279 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CTGFP29279 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CTGFP29279 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CTGFP29279 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.15■□□□□ 0.18
CTGFP29279 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.15■□□□□ 0.18
CTGFP29279 RPL3P2-204ENST00000413027 1203 ntBASIC16.15■□□□□ 0.18
CTGFP29279 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC16.15■□□□□ 0.18
CTGFP29279 AL161932.2-201ENST00000435436 679 ntBASIC16.15■□□□□ 0.18
CTGFP29279 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.15■□□□□ 0.18
CTGFP29279 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.15■□□□□ 0.18
CTGFP29279 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC16.15■□□□□ 0.18
CTGFP29279 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.15■□□□□ 0.18
CTGFP29279 CES1P2-201ENST00000566467 1242 ntBASIC16.15■□□□□ 0.18
CTGFP29279 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.15■□□□□ 0.18
CTGFP29279 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC16.15■□□□□ 0.18
CTGFP29279 AL136982.5-201ENST00000605222 294 ntBASIC16.15■□□□□ 0.18
CTGFP29279 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.15■□□□□ 0.18
CTGFP29279 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 AC233280.19-201ENST00000633223 136 ntBASIC16.15■□□□□ 0.18
CTGFP29279 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.15■□□□□ 0.18
CTGFP29279 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CTGFP29279 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.15■□□□□ 0.18
CTGFP29279 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.15■□□□□ 0.18
CTGFP29279 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 AL162727.3-201ENST00000635661 2787 ntBASIC16.15■□□□□ 0.18
CTGFP29279 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
CTGFP29279 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CTGFP29279 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CTGFP29279 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CTGFP29279 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CTGFP29279 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CTGFP29279 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CTGFP29279 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms