Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN3P26045 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN3P26045 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.02□□□□□ -0.01
PTPN3P26045 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN3P26045 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.02□□□□□ -0.01
PTPN3P26045 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN3P26045 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN3P26045 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.02□□□□□ -0.01
PTPN3P26045 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
PTPN3P26045 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN3P26045 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN3P26045 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PTPN3P26045 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.02□□□□□ -0.01
PTPN3P26045 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.01□□□□□ -0.01
PTPN3P26045 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
PTPN3P26045 AC020910.6-201ENST00000623084 1459 ntBASIC15.01□□□□□ -0.01
PTPN3P26045 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PTPN3P26045 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.01□□□□□ -0.01
PTPN3P26045 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PTPN3P26045 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.01□□□□□ -0.01
PTPN3P26045 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.01□□□□□ -0.01
PTPN3P26045 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.01□□□□□ -0.01
PTPN3P26045 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN3P26045 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.01□□□□□ -0.01
PTPN3P26045 U91328.1-201ENST00000437528 223 ntBASIC15.01□□□□□ -0.01
PTPN3P26045 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.01□□□□□ -0.01
PTPN3P26045 CHMP1AP1-201ENST00000445563 662 ntBASIC15.01□□□□□ -0.01
PTPN3P26045 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN3P26045 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN3P26045 CICP12-201ENST00000455801 843 ntBASIC15.01□□□□□ -0.01
PTPN3P26045 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.01□□□□□ -0.01
PTPN3P26045 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.01□□□□□ -0.01
PTPN3P26045 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN3P26045 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.01□□□□□ -0.01
PTPN3P26045 KRT17P8-201ENST00000540749 863 ntBASIC15.01□□□□□ -0.01
PTPN3P26045 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN3P26045 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.01□□□□□ -0.01
PTPN3P26045 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN3P26045 PPY2P-201ENST00000582808 702 ntBASIC15.01□□□□□ -0.01
PTPN3P26045 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.01□□□□□ -0.01
PTPN3P26045 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.01□□□□□ -0.01
PTPN3P26045 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.01□□□□□ -0.01
PTPN3P26045 AL162274.1-201ENST00000617191 1098 ntBASIC15.01□□□□□ -0.01
PTPN3P26045 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.01□□□□□ -0.01
PTPN3P26045 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
PTPN3P26045 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PTPN3P26045 AC016397.2-201ENST00000624848 1985 ntBASIC15.01□□□□□ -0.01
PTPN3P26045 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PTPN3P26045 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PTPN3P26045 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PTPN3P26045 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15□□□□□ -0.01
PTPN3P26045 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PTPN3P26045 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PTPN3P26045 AC079776.1-201ENST00000401540 1152 ntBASIC15□□□□□ -0.01
PTPN3P26045 BOLA2P3-201ENST00000404566 256 ntBASIC15□□□□□ -0.01
PTPN3P26045 AC112492.5-201ENST00000421897 457 ntBASIC15□□□□□ -0.01
PTPN3P26045 AC026954.1-201ENST00000429771 1293 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms