Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC005593.1-201ENST00000624894 515 ntBASIC11.38□□□□□ -0.59
RAB4AP20338 AP000550.4-202ENST00000639755 178 ntBASIC11.38□□□□□ -0.59
RAB4AP20338 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 AC055811.4-201ENST00000624039 1754 ntBASIC11.38□□□□□ -0.59
RAB4AP20338 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC11.38□□□□□ -0.59
RAB4AP20338 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RAB4AP20338 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC11.38□□□□□ -0.59
RAB4AP20338 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 KRT8P22-201ENST00000562317 1415 ntBASIC11.37□□□□□ -0.59
RAB4AP20338 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 SLC44A4-203ENST00000375562 2505 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 RPS2P1-201ENST00000434010 821 ntBASIC11.37□□□□□ -0.59
RAB4AP20338 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 PHKG1P2-201ENST00000457537 863 ntBASIC11.37□□□□□ -0.59
RAB4AP20338 TPT1P11-201ENST00000458482 498 ntBASIC11.37□□□□□ -0.59
RAB4AP20338 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC11.37□□□□□ -0.59
RAB4AP20338 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.37□□□□□ -0.59
RAB4AP20338 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.37□□□□□ -0.59
RAB4AP20338 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC11.37□□□□□ -0.59
RAB4AP20338 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 AC066615.1-201ENST00000640911 628 ntBASIC11.37□□□□□ -0.59
RAB4AP20338 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.37□□□□□ -0.59
RAB4AP20338 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
RAB4AP20338 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.37□□□□□ -0.59
RAB4AP20338 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
RAB4AP20338 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.37□□□□□ -0.59
RAB4AP20338 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RAB4AP20338 HDGFL3-201ENST00000299633 12733 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RAB4AP20338 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB4AP20338 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.36□□□□□ -0.59
RAB4AP20338 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.36□□□□□ -0.59
RAB4AP20338 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RAB4AP20338 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RAB4AP20338 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB4AP20338 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
RAB4AP20338 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.36□□□□□ -0.59
RAB4AP20338 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RAB4AP20338 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RAB4AP20338 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RAB4AP20338 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms