Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.15■□□□□ 0.18
CD4P01730 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 ACE3P-201ENST00000423435 1973 ntBASIC16.15■□□□□ 0.18
CD4P01730 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CD4P01730 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 OR2R1P-201ENST00000441404 914 ntBASIC16.15■□□□□ 0.18
CD4P01730 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 AP003398.1-201ENST00000531124 318 ntBASIC16.15■□□□□ 0.18
CD4P01730 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.15■□□□□ 0.18
CD4P01730 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.15■□□□□ 0.18
CD4P01730 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.15■□□□□ 0.18
CD4P01730 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.15■□□□□ 0.18
CD4P01730 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CD4P01730 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CD4P01730 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.15■□□□□ 0.18
CD4P01730 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.15■□□□□ 0.18
CD4P01730 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.15■□□□□ 0.18
CD4P01730 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CD4P01730 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.15■□□□□ 0.18
CD4P01730 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.15■□□□□ 0.18
CD4P01730 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CD4P01730 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CD4P01730 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CD4P01730 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 AC090502.4-201ENST00000551714 1386 ntBASIC16.14■□□□□ 0.17
CD4P01730 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 AC234644.1-201ENST00000406065 370 ntBASIC16.14■□□□□ 0.17
CD4P01730 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.14■□□□□ 0.17
CD4P01730 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.14■□□□□ 0.17
CD4P01730 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.14■□□□□ 0.17
CD4P01730 ALG1L6P-201ENST00000515248 758 ntBASIC16.14■□□□□ 0.17
CD4P01730 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
CD4P01730 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 AP000911.2-201ENST00000534330 502 ntBASIC16.14■□□□□ 0.17
CD4P01730 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.14■□□□□ 0.17
CD4P01730 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.14■□□□□ 0.17
CD4P01730 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CD4P01730 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.14■□□□□ 0.17
CD4P01730 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.14■□□□□ 0.17
CD4P01730 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
CD4P01730 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.14■□□□□ 0.17
CD4P01730 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CD4P01730 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CD4P01730 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.14■□□□□ 0.17
CD4P01730 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CD4P01730 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.13■□□□□ 0.17
CD4P01730 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.13■□□□□ 0.17
CD4P01730 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CD4P01730 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CD4P01730 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CD4P01730 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
CD4P01730 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.13■□□□□ 0.17
CD4P01730 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms