Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.55□□□□□ -0.08
PDGFBP01127 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDGFBP01127 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFBP01127 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFBP01127 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFBP01127 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC14.55□□□□□ -0.08
PDGFBP01127 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.55□□□□□ -0.08
PDGFBP01127 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFBP01127 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDGFBP01127 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 AD000864.1-201ENST00000624076 2295 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 GEMIN8P4-201ENST00000380526 729 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.54□□□□□ -0.08
PDGFBP01127 PGAM1P11-201ENST00000416729 680 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 IFNWP2-201ENST00000431203 580 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 CDCA4P4-201ENST00000435216 680 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.54□□□□□ -0.08
PDGFBP01127 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC14.54□□□□□ -0.08
PDGFBP01127 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 AL353622.2-201ENST00000605846 425 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC14.54□□□□□ -0.08
PDGFBP01127 AC090510.3-201ENST00000615831 821 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.54□□□□□ -0.08
PDGFBP01127 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.54□□□□□ -0.08
PDGFBP01127 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 AC067931.2-201ENST00000623655 2003 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 AC006504.5-208ENST00000588784 2401 ntBASIC14.54□□□□□ -0.08
PDGFBP01127 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PDGFBP01127 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PDGFBP01127 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
PDGFBP01127 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.53□□□□□ -0.08
PDGFBP01127 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PDGFBP01127 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFBP01127 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFBP01127 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PDGFBP01127 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC14.53□□□□□ -0.08
PDGFBP01127 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFBP01127 KRT8P30-201ENST00000432100 650 ntBASIC14.53□□□□□ -0.08
PDGFBP01127 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFBP01127 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC14.53□□□□□ -0.08
PDGFBP01127 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.53□□□□□ -0.08
PDGFBP01127 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.53□□□□□ -0.08
PDGFBP01127 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.53□□□□□ -0.08
PDGFBP01127 AL021707.6-201ENST00000609212 491 ntBASIC14.53□□□□□ -0.08
PDGFBP01127 MIR6125-201ENST00000618986 96 ntBASIC14.53□□□□□ -0.08
PDGFBP01127 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFBP01127 AC139713.2-207ENST00000641556 1292 ntBASIC14.53□□□□□ -0.08
PDGFBP01127 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.53□□□□□ -0.08
PDGFBP01127 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.53□□□□□ -0.08
PDGFBP01127 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PDGFBP01127 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PDGFBP01127 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
PDGFBP01127 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms