Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 MTHFR-210ENST00000641407 2387 ntBASIC13.87□□□□□ -0.19
HCN1O60741 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.87□□□□□ -0.19
HCN1O60741 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.87□□□□□ -0.19
HCN1O60741 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.87□□□□□ -0.19
HCN1O60741 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HCN1O60741 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 LILRP1-201ENST00000444199 1370 ntBASIC13.86□□□□□ -0.19
HCN1O60741 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.86□□□□□ -0.19
HCN1O60741 AC018529.2-202ENST00000611482 3087 ntBASIC13.86□□□□□ -0.19
HCN1O60741 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 KLF2P2-201ENST00000416807 1039 ntBASIC13.86□□□□□ -0.19
HCN1O60741 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 YBX1P6-201ENST00000442962 1002 ntBASIC13.86□□□□□ -0.19
HCN1O60741 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 AC023310.1-201ENST00000554836 735 ntBASIC13.86□□□□□ -0.19
HCN1O60741 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 AC244669.2-201ENST00000612320 853 ntBASIC13.86□□□□□ -0.19
HCN1O60741 AC145423.3-201ENST00000615987 467 ntBASIC13.86□□□□□ -0.19
HCN1O60741 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 TUBB1P2-201ENST00000422712 1306 ntBASIC13.86□□□□□ -0.19
HCN1O60741 TUBB1P1-201ENST00000503144 1300 ntBASIC13.86□□□□□ -0.19
HCN1O60741 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.86□□□□□ -0.19
HCN1O60741 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.86□□□□□ -0.19
HCN1O60741 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HCN1O60741 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 AC027601.5-201ENST00000624065 2482 ntBASIC13.85□□□□□ -0.19
HCN1O60741 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 AL359881.3-201ENST00000602640 1721 ntBASIC13.85□□□□□ -0.19
HCN1O60741 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HCN1O60741 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
HCN1O60741 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.85□□□□□ -0.19
HCN1O60741 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.85□□□□□ -0.19
HCN1O60741 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HCN1O60741 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.85□□□□□ -0.19
HCN1O60741 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.85□□□□□ -0.19
HCN1O60741 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms