Protein–RNA interactions for Protein: O60682

MSC, Musculin, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSCO60682 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MSCO60682 AL357563.1-201ENST00000404728 395 ntBASIC16.38■□□□□ 0.21
MSCO60682 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.38■□□□□ 0.21
MSCO60682 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.38■□□□□ 0.21
MSCO60682 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.38■□□□□ 0.21
MSCO60682 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.38■□□□□ 0.21
MSCO60682 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
MSCO60682 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.38■□□□□ 0.21
MSCO60682 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.38■□□□□ 0.21
MSCO60682 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
MSCO60682 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.38■□□□□ 0.21
MSCO60682 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.38■□□□□ 0.21
MSCO60682 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MSCO60682 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MSCO60682 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.38■□□□□ 0.21
MSCO60682 AJ011931.1-201ENST00000618749 2492 ntBASIC16.38■□□□□ 0.21
MSCO60682 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
MSCO60682 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
MSCO60682 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.37■□□□□ 0.21
MSCO60682 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.37■□□□□ 0.21
MSCO60682 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.37■□□□□ 0.21
MSCO60682 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MSCO60682 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.37■□□□□ 0.21
MSCO60682 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.37■□□□□ 0.21
MSCO60682 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MSCO60682 GCSHP3-201ENST00000431120 391 ntBASIC16.37■□□□□ 0.21
MSCO60682 AL512306.1-201ENST00000432698 848 ntBASIC16.37■□□□□ 0.21
MSCO60682 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.37■□□□□ 0.21
MSCO60682 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MSCO60682 AC084752.1-201ENST00000509766 622 ntBASIC16.37■□□□□ 0.21
MSCO60682 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC16.37■□□□□ 0.21
MSCO60682 CR383656.3-201ENST00000551315 183 ntBASIC16.37■□□□□ 0.21
MSCO60682 MIR5196-201ENST00000578146 115 ntBASIC16.37■□□□□ 0.21
MSCO60682 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.37■□□□□ 0.21
MSCO60682 LINC00431-202ENST00000636375 159 ntBASIC16.37■□□□□ 0.21
MSCO60682 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.37■□□□□ 0.21
MSCO60682 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.37■□□□□ 0.21
MSCO60682 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.37■□□□□ 0.21
MSCO60682 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MSCO60682 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MSCO60682 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.37■□□□□ 0.21
MSCO60682 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MSCO60682 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.37■□□□□ 0.21
MSCO60682 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.37■□□□□ 0.21
MSCO60682 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.36■□□□□ 0.21
MSCO60682 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
MSCO60682 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.36■□□□□ 0.21
MSCO60682 LINC01101-201ENST00000622953 1884 ntBASIC16.36■□□□□ 0.21
MSCO60682 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MSCO60682 GUSBP10-201ENST00000417412 665 ntBASIC16.36■□□□□ 0.21
MSCO60682 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.36■□□□□ 0.21
MSCO60682 DPY19L2P5-201ENST00000456300 331 ntBASIC16.36■□□□□ 0.21
MSCO60682 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.36■□□□□ 0.21
MSCO60682 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC16.36■□□□□ 0.21
MSCO60682 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.36■□□□□ 0.21
MSCO60682 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.36■□□□□ 0.21
MSCO60682 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 KRT8P1-201ENST00000557533 1207 ntBASIC16.36■□□□□ 0.21
MSCO60682 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.36■□□□□ 0.21
MSCO60682 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC16.36■□□□□ 0.21
MSCO60682 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MSCO60682 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MSCO60682 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms