Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TRAF3IP2O43734 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 AC090505.1-201ENST00000430515 1834 ntBASIC13.13□□□□□ -0.31
TRAF3IP2O43734 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 KRT8P28-201ENST00000433288 1390 ntBASIC13.13□□□□□ -0.31
TRAF3IP2O43734 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 AC010141.1-201ENST00000411585 623 ntBASIC13.13□□□□□ -0.31
TRAF3IP2O43734 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 HIST2H2BB-201ENST00000449108 381 ntBASIC13.13□□□□□ -0.31
TRAF3IP2O43734 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 AC023310.1-201ENST00000554836 735 ntBASIC13.13□□□□□ -0.31
TRAF3IP2O43734 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 MIR6074-201ENST00000612054 107 ntBASIC13.13□□□□□ -0.31
TRAF3IP2O43734 MIR6775-201ENST00000617557 69 ntBASIC13.13□□□□□ -0.31
TRAF3IP2O43734 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 HSPA7-201ENST00000445535 1927 ntBASIC13.13□□□□□ -0.31
TRAF3IP2O43734 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAF3IP2O43734 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AC152010.1-201ENST00000415779 2006 ntBASIC13.12□□□□□ -0.31
TRAF3IP2O43734 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 HOMER2P2-201ENST00000451621 847 ntBASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AC119751.2-201ENST00000504529 210 ntBASIC13.12□□□□□ -0.31
TRAF3IP2O43734 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AC008825.2-201ENST00000603374 718 ntBASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AL136301.1-201ENST00000615830 422 ntBASIC13.12□□□□□ -0.31
TRAF3IP2O43734 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAF3IP2O43734 RN7SL832P-201ENST00000607781 1756 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms