Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.88□□□□□ -0.51
SRRM4A7MD48 AP000593.2-201ENST00000542775 1433 ntBASIC11.88□□□□□ -0.51
SRRM4A7MD48 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 TPM3P8-201ENST00000330554 643 ntBASIC11.88□□□□□ -0.51
SRRM4A7MD48 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 AC092933.1-201ENST00000393644 945 ntBASIC11.88□□□□□ -0.51
SRRM4A7MD48 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 SLC25A47P1-201ENST00000531577 414 ntBASIC11.88□□□□□ -0.51
SRRM4A7MD48 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 ECM1P1-201ENST00000604092 1279 ntBASIC11.88□□□□□ -0.51
SRRM4A7MD48 MIR6074-201ENST00000612054 107 ntBASIC11.88□□□□□ -0.51
SRRM4A7MD48 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 AC011474.4-201ENST00000623523 2076 ntBASIC11.88□□□□□ -0.51
SRRM4A7MD48 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 AC020910.6-201ENST00000623084 1459 ntBASIC11.88□□□□□ -0.51
SRRM4A7MD48 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM4A7MD48 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM4A7MD48 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 KHSRPP1-201ENST00000427983 1768 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 GOLGA8VP-201ENST00000559009 1798 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 AC005229.1-201ENST00000392885 409 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 AL355864.2-201ENST00000447420 863 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 BCRP2-202ENST00000447763 634 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 AC007389.4-201ENST00000454674 793 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 AC011495.1-201ENST00000498085 584 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 ALG3P1-201ENST00000508806 1114 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 BCRP6-201ENST00000510112 632 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 BCRP7-201ENST00000511549 544 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM4A7MD48 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC11.87□□□□□ -0.51
SRRM4A7MD48 AC106820.3-201ENST00000561653 397 ntBASIC11.87□□□□□ -0.51
SRRM4A7MD48 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms