Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.33□□□□□ -0.12
C4orf47A7E2U8 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 GCSHP3-201ENST00000431120 391 ntBASIC14.33□□□□□ -0.12
C4orf47A7E2U8 XBP1P1-201ENST00000436573 652 ntBASIC14.33□□□□□ -0.12
C4orf47A7E2U8 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 AC005041.3-201ENST00000606287 649 ntBASIC14.33□□□□□ -0.12
C4orf47A7E2U8 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.33□□□□□ -0.12
C4orf47A7E2U8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ALG3P1-201ENST00000508806 1114 ntBASIC14.32□□□□□ -0.12
C4orf47A7E2U8 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 AC027237.1-201ENST00000560942 655 ntBASIC14.32□□□□□ -0.12
C4orf47A7E2U8 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 EIF5AP2-201ENST00000585668 1047 ntBASIC14.32□□□□□ -0.12
C4orf47A7E2U8 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 AP000322.3-201ENST00000608665 388 ntBASIC14.32□□□□□ -0.12
C4orf47A7E2U8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 AL451007.2-201ENST00000632004 563 ntBASIC14.32□□□□□ -0.12
C4orf47A7E2U8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 AC002472.4-201ENST00000641915 272 ntBASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 TNRC18P2-201ENST00000417666 2714 ntBASIC14.32□□□□□ -0.12
C4orf47A7E2U8 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 MARK2P16-201ENST00000605714 1723 ntBASIC14.32□□□□□ -0.12
C4orf47A7E2U8 AC022532.1-201ENST00000624563 1728 ntBASIC14.32□□□□□ -0.12
C4orf47A7E2U8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms