Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 RN7SL480P-201ENST00000581481 294 ntBASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 PCDHA14-201ENST00000506751 2298 ntBASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM88BA6NKF7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 AIG1-203ENST00000367596 559 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 BX088651.3-201ENST00000418155 352 ntBASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 BX322534.1-201ENST00000635574 241 ntBASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 AC215524.1-201ENST00000635696 241 ntBASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 AC105250.1-201ENST00000509378 2057 ntBASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TMEM88BA6NKF7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AC024909.3-201ENST00000611513 2257 ntBASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 ABCD1P4-201ENST00000399687 604 ntBASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AL359092.2-201ENST00000423330 585 ntBASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 RN7SL351P-201ENST00000469306 248 ntBASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 GOLGA2P8-201ENST00000505201 779 ntBASIC16.67■□□□□ 0.26
TMEM88BA6NKF7 AC093300.1-201ENST00000510368 1201 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms