Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 AC100850.1-201ENST00000506768 649 ntBASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 AC131206.1-201ENST00000538078 1211 ntBASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 RN7SL596P-201ENST00000582123 288 ntBASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 MIR4649-201ENST00000582839 64 ntBASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 RN7SL163P-201ENST00000583100 276 ntBASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HPS5Q9UPZ3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 AC139749.1-202ENST00000617529 3139 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 AC009093.2-202ENST00000620513 2079 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 RPS9P1-201ENST00000419943 583 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 ISCA2P1-201ENST00000425548 448 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 AC079112.1-201ENST00000454972 939 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 MARK2P5-201ENST00000507649 634 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 ALG1L13P-202ENST00000519320 584 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 RBM8B-201ENST00000555532 525 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 ZACNP1-201ENST00000612259 710 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 KRT8P4-201ENST00000509735 1454 ntBASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HPS5Q9UPZ3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 AP002803.1-201ENST00000528836 498 ntBASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
HPS5Q9UPZ3 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms