Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UBQLN2Q9UHD9 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 MAPK10-262ENST00000641051 5738 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 MIR1233-2-201ENST00000408138 82 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 MIR1233-1-201ENST00000408722 82 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 AC004832.2-201ENST00000426397 482 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 FAM58CP-201ENST00000435741 640 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 DNAJB3-201ENST00000446806 729 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 ALG1L5P-201ENST00000482043 771 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 AL645728.2-201ENST00000641974 660 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 AC022497.1-201ENST00000624916 3691 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 AC024075.2-201ENST00000598112 1473 ntBASIC12.53□□□□□ -0.4
UBQLN2Q9UHD9 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
UBQLN2Q9UHD9 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.52□□□□□ -0.41
UBQLN2Q9UHD9 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBQLN2Q9UHD9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UBQLN2Q9UHD9 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms