Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 ORAOV1P1-201ENST00000503108 395 ntBASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 PEBP1P2-201ENST00000603980 558 ntBASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 MIR6720-201ENST00000611664 98 ntBASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 PRAL-201ENST00000624952 3286 ntBASIC16.21■□□□□ 0.19
UBE2OQ9C0C9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2OQ9C0C9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2OQ9C0C9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2OQ9C0C9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2OQ9C0C9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2OQ9C0C9 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
UBE2OQ9C0C9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 AC138035.3-201ENST00000622706 2791 ntBASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 AP000911.2-201ENST00000534330 502 ntBASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 AC055811.3-201ENST00000584952 686 ntBASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 AC092127.1-201ENST00000567093 3455 ntBASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 AC084364.1-201ENST00000551967 1556 ntBASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 TNRC18P2-201ENST00000417666 2714 ntBASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 AC006058.4-201ENST00000624016 1670 ntBASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 REXO1L5P-201ENST00000622260 2098 ntBASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.2■□□□□ 0.18
UBE2OQ9C0C9 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 HLA-K-203ENST00000430151 1046 ntBASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 FTH1P22-201ENST00000456305 520 ntBASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 AC244197.1-201ENST00000456494 951 ntBASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 AC027237.1-201ENST00000560942 655 ntBASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 AC138696.2-201ENST00000607376 223 ntBASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 MIR6816-201ENST00000620368 66 ntBASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 AC011471.3-201ENST00000623576 402 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms