Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.63□□□□□ -0.23
TRIM2Q9C040 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRIM2Q9C040 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 BAATP1-201ENST00000412284 1225 ntBASIC13.62□□□□□ -0.23
TRIM2Q9C040 ACTG1P3-201ENST00000431775 1114 ntBASIC13.62□□□□□ -0.23
TRIM2Q9C040 AC012441.1-201ENST00000446669 685 ntBASIC13.62□□□□□ -0.23
TRIM2Q9C040 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 HILS1-202ENST00000545329 423 ntBASIC13.62□□□□□ -0.23
TRIM2Q9C040 PTP4A1P2-201ENST00000546033 454 ntBASIC13.62□□□□□ -0.23
TRIM2Q9C040 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 AC004466.1-201ENST00000599515 1080 ntBASIC13.62□□□□□ -0.23
TRIM2Q9C040 MIR6752-201ENST00000618442 71 ntBASIC13.62□□□□□ -0.23
TRIM2Q9C040 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRIM2Q9C040 AC134312.5-201ENST00000568031 1313 ntBASIC13.62□□□□□ -0.23
TRIM2Q9C040 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRIM2Q9C040 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRIM2Q9C040 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 AC007389.4-201ENST00000454674 793 ntBASIC13.61□□□□□ -0.23
TRIM2Q9C040 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 MESTP3-201ENST00000503460 968 ntBASIC13.61□□□□□ -0.23
TRIM2Q9C040 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 KRT17P8-201ENST00000540749 863 ntBASIC13.61□□□□□ -0.23
TRIM2Q9C040 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 RN7SL48P-201ENST00000579283 293 ntBASIC13.61□□□□□ -0.23
TRIM2Q9C040 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 ENPP7P14-201ENST00000621765 1040 ntBASIC13.61□□□□□ -0.23
TRIM2Q9C040 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRIM2Q9C040 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms