Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 AC215219.1-201ENST00000400706 1817 ntBASIC16.71■□□□□ 0.27
TRIM44Q96DX7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 AC073621.1-201ENST00000392730 636 ntBASIC16.71■□□□□ 0.27
TRIM44Q96DX7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 KRT18P27-201ENST00000427733 1299 ntBASIC16.71■□□□□ 0.27
TRIM44Q96DX7 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 RNA5SP410-201ENST00000516285 106 ntBASIC16.71■□□□□ 0.27
TRIM44Q96DX7 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.71■□□□□ 0.27
TRIM44Q96DX7 AC025062.2-201ENST00000605477 670 ntBASIC16.71■□□□□ 0.27
TRIM44Q96DX7 MIR1199-201ENST00000621445 119 ntBASIC16.71■□□□□ 0.27
TRIM44Q96DX7 AC107918.4-202ENST00000641623 219 ntBASIC16.71■□□□□ 0.27
TRIM44Q96DX7 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM44Q96DX7 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TRIM44Q96DX7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.7■□□□□ 0.26
TRIM44Q96DX7 AC136604.1-202ENST00000425471 771 ntBASIC16.7■□□□□ 0.26
TRIM44Q96DX7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 SCARNA2-201ENST00000458748 420 ntBASIC16.7■□□□□ 0.26
TRIM44Q96DX7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 AL355877.3-201ENST00000622820 899 ntBASIC16.7■□□□□ 0.26
TRIM44Q96DX7 AC004790.2-201ENST00000623588 572 ntBASIC16.7■□□□□ 0.26
TRIM44Q96DX7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 TRIM80P-201ENST00000455685 2848 ntBASIC16.7■□□□□ 0.26
TRIM44Q96DX7 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRIM44Q96DX7 BX324167.2-201ENST00000623717 3316 ntBASIC16.7■□□□□ 0.26
TRIM44Q96DX7 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 AP3S2-216ENST00000617003 1561 ntBASIC16.69■□□□□ 0.26
TRIM44Q96DX7 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM44Q96DX7 KRT18P57-201ENST00000443599 1254 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms