Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HDAC11Q96DB2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 SNX18-202ENST00000343017 3140 ntBASIC15.21■□□□□ 0.03
HDAC11Q96DB2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 AC009093.2-202ENST00000620513 2079 ntBASIC15.21■□□□□ 0.03
HDAC11Q96DB2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 FAM8A4P-201ENST00000435433 1213 ntBASIC15.21■□□□□ 0.03
HDAC11Q96DB2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 GAPDHP21-201ENST00000450301 1010 ntBASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 AC106886.1-201ENST00000568660 600 ntBASIC15.21■□□□□ 0.03
HDAC11Q96DB2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 AP001002.3-201ENST00000623482 206 ntBASIC15.21■□□□□ 0.03
HDAC11Q96DB2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HDAC11Q96DB2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.21■□□□□ 0.02
HDAC11Q96DB2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.21■□□□□ 0.02
HDAC11Q96DB2 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
HDAC11Q96DB2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
HDAC11Q96DB2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HDAC11Q96DB2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HDAC11Q96DB2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HDAC11Q96DB2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 PEG13-201ENST00000631594 5667 ntBASIC15.2■□□□□ 0.02
HDAC11Q96DB2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 AC006001.1-201ENST00000325130 474 ntBASIC15.2■□□□□ 0.02
HDAC11Q96DB2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 AC004945.1-201ENST00000416738 983 ntBASIC15.2■□□□□ 0.02
HDAC11Q96DB2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 OR10B1P-201ENST00000601666 907 ntBASIC15.2■□□□□ 0.02
HDAC11Q96DB2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
HDAC11Q96DB2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms