Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AL157407.1-201ENST00000435784 904 ntBASIC12.94□□□□□ -0.34
TMEM54Q969K7 AL645933.1-201ENST00000440087 609 ntBASIC12.94□□□□□ -0.34
TMEM54Q969K7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 AC239800.4-201ENST00000603712 296 ntBASIC12.94□□□□□ -0.34
TMEM54Q969K7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TMEM54Q969K7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TMEM54Q969K7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AL136379.1-201ENST00000623471 2642 ntBASIC12.93□□□□□ -0.34
TMEM54Q969K7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AC244394.1-201ENST00000435000 1665 ntBASIC12.93□□□□□ -0.34
TMEM54Q969K7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AC136759.1-202ENST00000530858 2194 ntBASIC12.93□□□□□ -0.34
TMEM54Q969K7 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AC016397.2-201ENST00000624848 1985 ntBASIC12.93□□□□□ -0.34
TMEM54Q969K7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AL354877.1-201ENST00000424412 413 ntBASIC12.93□□□□□ -0.34
TMEM54Q969K7 FAM21FP-201ENST00000426241 1131 ntBASIC12.93□□□□□ -0.34
TMEM54Q969K7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 RNA5SP412-201ENST00000516234 123 ntBASIC12.93□□□□□ -0.34
TMEM54Q969K7 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 MIR6720-201ENST00000611664 98 ntBASIC12.93□□□□□ -0.34
TMEM54Q969K7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 TMBIM7P-202ENST00000641474 1516 ntBASIC12.93□□□□□ -0.34
TMEM54Q969K7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TMEM54Q969K7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TMEM54Q969K7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TMEM54Q969K7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
TMEM54Q969K7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms