Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMARCC2Q8TAQ2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 TUBB1P2-201ENST00000422712 1306 ntBASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 TUBB1P1-201ENST00000503144 1300 ntBASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 BRWD1P1-201ENST00000401091 371 ntBASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 HOMER2P2-201ENST00000451621 847 ntBASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 MIR4741-201ENST00000579822 90 ntBASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMARCC2Q8TAQ2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 AC011498.7-201ENST00000624986 2027 ntBASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 CNN2P10-201ENST00000443067 918 ntBASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 RPL13AP20-201ENST00000459725 609 ntBASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 AP006547.1-201ENST00000563435 692 ntBASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 RN7SL219P-201ENST00000582872 296 ntBASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SMARCC2Q8TAQ2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms