Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
BEST4Q8NFU0 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 AGGF1P1-201ENST00000509500 2073 ntBASIC12.81□□□□□ -0.36
BEST4Q8NFU0 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 PCDHA5-203ENST00000614258 4248 ntBASIC12.81□□□□□ -0.36
BEST4Q8NFU0 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 SERBP1P3-201ENST00000459980 809 ntBASIC12.81□□□□□ -0.36
BEST4Q8NFU0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 AL079307.3-201ENST00000556114 283 ntBASIC12.81□□□□□ -0.36
BEST4Q8NFU0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 AC022145.2-201ENST00000598203 171 ntBASIC12.81□□□□□ -0.36
BEST4Q8NFU0 AC120114.3-201ENST00000611923 658 ntBASIC12.81□□□□□ -0.36
BEST4Q8NFU0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 LINC00628-201ENST00000628516 1289 ntBASIC12.81□□□□□ -0.36
BEST4Q8NFU0 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
BEST4Q8NFU0 AC018665.1-201ENST00000622927 1362 ntBASIC12.81□□□□□ -0.36
BEST4Q8NFU0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AC004945.1-201ENST00000416738 983 ntBASIC12.8□□□□□ -0.36
BEST4Q8NFU0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 FAM58DP-201ENST00000428076 619 ntBASIC12.8□□□□□ -0.36
BEST4Q8NFU0 HTR5BP-201ENST00000430851 1154 ntBASIC12.8□□□□□ -0.36
BEST4Q8NFU0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms