Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.41■□□□□ 0.38
SLX4Q8IY92 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLX4Q8IY92 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 OR7E115P-201ENST00000382617 1024 ntBASIC17.4■□□□□ 0.38
SLX4Q8IY92 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 AP000244.1-201ENST00000424582 201 ntBASIC17.4■□□□□ 0.38
SLX4Q8IY92 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 RN7SL128P-201ENST00000467883 305 ntBASIC17.4■□□□□ 0.38
SLX4Q8IY92 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 CES1P2-201ENST00000566467 1242 ntBASIC17.4■□□□□ 0.38
SLX4Q8IY92 GGNBP1-204ENST00000613113 887 ntBASIC17.4■□□□□ 0.38
SLX4Q8IY92 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 IGHEP1-201ENST00000521393 651 ntBASIC17.4■□□□□ 0.38
SLX4Q8IY92 AL590235.1-201ENST00000564650 861 ntBASIC17.4■□□□□ 0.38
SLX4Q8IY92 AC018846.1-201ENST00000568231 183 ntBASIC17.4■□□□□ 0.38
SLX4Q8IY92 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLX4Q8IY92 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.4■□□□□ 0.38
SLX4Q8IY92 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLX4Q8IY92 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.39■□□□□ 0.38
SLX4Q8IY92 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SLX4Q8IY92 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SLX4Q8IY92 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SLX4Q8IY92 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SLX4Q8IY92 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLX4Q8IY92 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLX4Q8IY92 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLX4Q8IY92 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLX4Q8IY92 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLX4Q8IY92 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLX4Q8IY92 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLX4Q8IY92 AC092570.1-201ENST00000414446 469 ntBASIC17.39■□□□□ 0.37
SLX4Q8IY92 AC136604.1-202ENST00000425471 771 ntBASIC17.39■□□□□ 0.37
SLX4Q8IY92 AC104961.1-201ENST00000427605 771 ntBASIC17.39■□□□□ 0.37
SLX4Q8IY92 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 NRADDP-201ENST00000437305 691 ntBASIC17.39■□□□□ 0.37
SLX4Q8IY92 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLX4Q8IY92 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 FTLP5-201ENST00000586853 534 ntBASIC17.39■□□□□ 0.37
SLX4Q8IY92 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 AC104506.1-201ENST00000609247 429 ntBASIC17.39■□□□□ 0.37
SLX4Q8IY92 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLX4Q8IY92 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.39■□□□□ 0.37
SLX4Q8IY92 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.38■□□□□ 0.37
SLX4Q8IY92 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLX4Q8IY92 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLX4Q8IY92 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLX4Q8IY92 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.38■□□□□ 0.37
SLX4Q8IY92 GOLGA8UP-201ENST00000527159 1755 ntBASIC17.38■□□□□ 0.37
SLX4Q8IY92 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.38■□□□□ 0.37
SLX4Q8IY92 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SLX4Q8IY92 BCL2-203ENST00000589955 5011 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms