Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 MIR645-201ENST00000385283 94 ntBASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NPAS4Q8IUM7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 AC091951.1-201ENST00000512854 2465 ntBASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 ERP29P1-201ENST00000442902 706 ntBASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 AC004837.1-201ENST00000446267 564 ntBASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 AL157792.1-201ENST00000488281 530 ntBASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 CR383656.3-201ENST00000551315 183 ntBASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NPAS4Q8IUM7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
NPAS4Q8IUM7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS4Q8IUM7 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.58■□□□□ 0.09
NPAS4Q8IUM7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS4Q8IUM7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS4Q8IUM7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS4Q8IUM7 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS4Q8IUM7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NPAS4Q8IUM7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
NPAS4Q8IUM7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 BAK1P1-201ENST00000317045 636 ntBASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 OR8T1P-201ENST00000421347 918 ntBASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 ALG1L13P-202ENST00000519320 584 ntBASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 HERC2P11-201ENST00000562845 725 ntBASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 AC100756.2-201ENST00000569537 736 ntBASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 AC005041.3-201ENST00000606287 649 ntBASIC15.58■□□□□ 0.08
NPAS4Q8IUM7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms