Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 AL645937.2-201ENST00000396808 931 ntBASIC15.68■□□□□ 0.1
RNF135Q8IUD6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 AP002803.1-201ENST00000528836 498 ntBASIC15.68■□□□□ 0.1
RNF135Q8IUD6 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 AL162426.1-201ENST00000624141 743 ntBASIC15.68■□□□□ 0.1
RNF135Q8IUD6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.68■□□□□ 0.1
RNF135Q8IUD6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF135Q8IUD6 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 AC006058.4-201ENST00000624016 1670 ntBASIC15.67■□□□□ 0.1
RNF135Q8IUD6 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 AC010234.1-201ENST00000494599 870 ntBASIC15.67■□□□□ 0.1
RNF135Q8IUD6 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 MIR4649-201ENST00000582839 64 ntBASIC15.67■□□□□ 0.1
RNF135Q8IUD6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 AC148477.9-201ENST00000623974 539 ntBASIC15.67■□□□□ 0.1
RNF135Q8IUD6 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF135Q8IUD6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF135Q8IUD6 PIN4P1-201ENST00000451079 396 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms