Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AC016397.2-201ENST00000624848 1985 ntBASIC13.73□□□□□ -0.21
TUBA1AQ71U36 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 AL158212.4-201ENST00000624062 1286 ntBASIC13.73□□□□□ -0.21
TUBA1AQ71U36 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TUBA1AQ71U36 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 PIN1P1-201ENST00000412108 996 ntBASIC13.72□□□□□ -0.21
TUBA1AQ71U36 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 CHCHD2P3-201ENST00000603038 451 ntBASIC13.72□□□□□ -0.21
TUBA1AQ71U36 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.72□□□□□ -0.21
TUBA1AQ71U36 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 AC073548.1-201ENST00000624088 1882 ntBASIC13.72□□□□□ -0.21
TUBA1AQ71U36 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TUBA1AQ71U36 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 AL035633.1-201ENST00000406139 838 ntBASIC13.71□□□□□ -0.21
TUBA1AQ71U36 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TUBA1AQ71U36 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms