Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SYNE3Q6ZMZ3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 AC138969.2-201ENST00000532739 9932 ntBASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 MIR1909-201ENST00000411312 80 ntBASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 AC017083.2-201ENST00000608069 979 ntBASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 BX088702.1-201ENST00000610784 235 ntBASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 AC002472.3-201ENST00000640124 621 ntBASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.4■□□□□ 0.38
SYNE3Q6ZMZ3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.38
SYNE3Q6ZMZ3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SYNE3Q6ZMZ3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 AC022447.6-201ENST00000515522 438 ntBASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 AP005482.1-201ENST00000563722 1273 ntBASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 ZACNP1-201ENST00000612259 710 ntBASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 AC133552.6-201ENST00000613406 534 ntBASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 MIR6775-201ENST00000617557 69 ntBASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SYNE3Q6ZMZ3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 AC097359.2-201ENST00000604992 2389 ntBASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 AC092053.3-201ENST00000641308 4975 ntBASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 AC026954.1-201ENST00000429771 1293 ntBASIC17.38■□□□□ 0.37
SYNE3Q6ZMZ3 HOMER2P2-201ENST00000451621 847 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 918.6 ms