Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TTC39BQ5VTQ0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 AP001267.2-201ENST00000532619 2086 ntBASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 AC003102.2-201ENST00000589195 1469 ntBASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 AC011840.2-201ENST00000563063 1520 ntBASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 AC004945.1-201ENST00000416738 983 ntBASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 AP006547.1-201ENST00000563435 692 ntBASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.4■□□□□ 0.06
TTC39BQ5VTQ0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 AC136759.1-202ENST00000530858 2194 ntBASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 RN7SKP230-201ENST00000365642 335 ntBASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 MIR4741-201ENST00000579822 90 ntBASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 AC005840.4-201ENST00000541242 2494 ntBASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 SALL4P5-201ENST00000419001 1760 ntBASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.39■□□□□ 0.05
TTC39BQ5VTQ0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms