Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 AC093214.1-201ENST00000511688 1107 ntBASIC11.4□□□□□ -0.58
HIST1H1AQ02539 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 AC009407.1-201ENST00000568958 598 ntBASIC11.4□□□□□ -0.58
HIST1H1AQ02539 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
HIST1H1AQ02539 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
HIST1H1AQ02539 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.4□□□□□ -0.59
HIST1H1AQ02539 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
HIST1H1AQ02539 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
HIST1H1AQ02539 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
HIST1H1AQ02539 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
HIST1H1AQ02539 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
HIST1H1AQ02539 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
HIST1H1AQ02539 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 BASP1P1-201ENST00000430708 665 ntBASIC11.39□□□□□ -0.59
HIST1H1AQ02539 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 FAM86LP-201ENST00000478302 853 ntBASIC11.39□□□□□ -0.59
HIST1H1AQ02539 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TPRX2P-201ENST00000535362 881 ntBASIC11.39□□□□□ -0.59
HIST1H1AQ02539 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 AL049840.4-201ENST00000602422 811 ntBASIC11.39□□□□□ -0.59
HIST1H1AQ02539 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC11.39□□□□□ -0.59
HIST1H1AQ02539 AL157414.3-201ENST00000624276 1954 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms