Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN8P56748 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN8P56748 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN8P56748 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN8P56748 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CLDN8P56748 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.04□□□□□ -0.16
CLDN8P56748 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
CLDN8P56748 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 BAATP1-201ENST00000412284 1225 ntBASIC14.03□□□□□ -0.16
CLDN8P56748 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN8P56748 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 AC012441.1-201ENST00000446669 685 ntBASIC14.03□□□□□ -0.16
CLDN8P56748 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.03□□□□□ -0.16
CLDN8P56748 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN8P56748 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.03□□□□□ -0.16
CLDN8P56748 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.03□□□□□ -0.16
CLDN8P56748 LINC02560-201ENST00000596379 459 ntBASIC14.03□□□□□ -0.16
CLDN8P56748 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN8P56748 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDN8P56748 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CLDN8P56748 MSTO2P-201ENST00000314835 1709 ntBASIC14.03□□□□□ -0.16
CLDN8P56748 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CLDN8P56748 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CLDN8P56748 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN8P56748 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDN8P56748 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN8P56748 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.02□□□□□ -0.16
CLDN8P56748 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN8P56748 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 AL138709.1-201ENST00000614840 1693 ntBASIC14.02□□□□□ -0.16
CLDN8P56748 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN8P56748 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN8P56748 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN8P56748 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CLDN8P56748 AP000593.2-201ENST00000542775 1433 ntBASIC14.02□□□□□ -0.16
CLDN8P56748 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN8P56748 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 AC134312.5-201ENST00000568031 1313 ntBASIC14.02□□□□□ -0.17
CLDN8P56748 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN8P56748 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 MIR661-201ENST00000384842 89 ntBASIC14.02□□□□□ -0.17
CLDN8P56748 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN8P56748 ACTG1P3-201ENST00000431775 1114 ntBASIC14.02□□□□□ -0.17
CLDN8P56748 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN8P56748 PUDPP3-201ENST00000445368 636 ntBASIC14.02□□□□□ -0.17
CLDN8P56748 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN8P56748 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN8P56748 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CLDN8P56748 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN8P56748 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.02□□□□□ -0.17
CLDN8P56748 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.02□□□□□ -0.17
CLDN8P56748 AL391280.1-201ENST00000506969 1062 ntBASIC14.02□□□□□ -0.17
CLDN8P56748 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms