Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN6P56747 AL807761.2-201ENST00000422849 729 ntBASIC14.12□□□□□ -0.15
CLDN6P56747 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN6P56747 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.12□□□□□ -0.15
CLDN6P56747 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLDN6P56747 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 SIGLEC18P-201ENST00000602271 909 ntBASIC14.12□□□□□ -0.15
CLDN6P56747 AC007326.1-201ENST00000604539 458 ntBASIC14.12□□□□□ -0.15
CLDN6P56747 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN6P56747 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 AP000845.1-201ENST00000581677 2131 ntBASIC14.12□□□□□ -0.15
CLDN6P56747 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 AC018629.1-201ENST00000623381 1736 ntBASIC14.12□□□□□ -0.15
CLDN6P56747 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 AC012508.2-201ENST00000567613 1472 ntBASIC14.12□□□□□ -0.15
CLDN6P56747 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN6P56747 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.12□□□□□ -0.15
CLDN6P56747 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 AC073347.1-201ENST00000421633 2643 ntBASIC14.11□□□□□ -0.15
CLDN6P56747 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN6P56747 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN6P56747 LILRP1-201ENST00000444199 1370 ntBASIC14.11□□□□□ -0.15
CLDN6P56747 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN6P56747 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN6P56747 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CLDN6P56747 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN6P56747 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN6P56747 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.11□□□□□ -0.15
CLDN6P56747 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN6P56747 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN6P56747 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN6P56747 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 AC008825.2-201ENST00000603374 718 ntBASIC14.11□□□□□ -0.15
CLDN6P56747 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.11□□□□□ -0.15
CLDN6P56747 AL132780.4-201ENST00000624870 1135 ntBASIC14.11□□□□□ -0.15
CLDN6P56747 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN6P56747 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN6P56747 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN6P56747 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN6P56747 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN6P56747 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN6P56747 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN6P56747 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN6P56747 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN6P56747 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN6P56747 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN6P56747 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN6P56747 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN6P56747 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN6P56747 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN6P56747 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN6P56747 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLDN6P56747 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN6P56747 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
CLDN6P56747 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN6P56747 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN6P56747 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN6P56747 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN6P56747 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms