Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 GPALPP1-207ENST00000611650 899 ntBASIC13.82□□□□□ -0.2
CDH12P55289 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH12P55289 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH12P55289 BX539320.1-201ENST00000623759 877 ntBASIC13.82□□□□□ -0.2
CDH12P55289 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH12P55289 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH12P55289 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 SLC7A15P-201ENST00000424028 1363 ntBASIC13.82□□□□□ -0.2
CDH12P55289 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.82□□□□□ -0.2
CDH12P55289 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH12P55289 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
CDH12P55289 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH12P55289 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CDH12P55289 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 AC130686.1-201ENST00000622936 2466 ntBASIC13.81□□□□□ -0.2
CDH12P55289 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 KRT8P24-201ENST00000560290 1559 ntBASIC13.81□□□□□ -0.2
CDH12P55289 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 AC134915.1-201ENST00000426461 574 ntBASIC13.81□□□□□ -0.2
CDH12P55289 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH12P55289 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.81□□□□□ -0.2
CDH12P55289 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 UGT1A2P-201ENST00000454886 866 ntBASIC13.81□□□□□ -0.2
CDH12P55289 INGX-202ENST00000489074 768 ntBASIC13.81□□□□□ -0.2
CDH12P55289 AC093004.1-201ENST00000508850 424 ntBASIC13.81□□□□□ -0.2
CDH12P55289 AC104596.2-201ENST00000512793 793 ntBASIC13.81□□□□□ -0.2
CDH12P55289 RNA5SP421-201ENST00000516864 134 ntBASIC13.81□□□□□ -0.2
CDH12P55289 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 AC055876.2-201ENST00000531834 546 ntBASIC13.81□□□□□ -0.2
CDH12P55289 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.81□□□□□ -0.2
CDH12P55289 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 AC099568.2-201ENST00000609194 695 ntBASIC13.81□□□□□ -0.2
CDH12P55289 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.81□□□□□ -0.2
CDH12P55289 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.81□□□□□ -0.2
CDH12P55289 AC007431.3-201ENST00000623221 587 ntBASIC13.81□□□□□ -0.2
CDH12P55289 PRSS30P-206ENST00000641773 873 ntBASIC13.81□□□□□ -0.2
CDH12P55289 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDH12P55289 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDH12P55289 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 CICP16-201ENST00000502609 2813 ntBASIC13.81□□□□□ -0.2
CDH12P55289 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH12P55289 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH12P55289 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH12P55289 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CDH12P55289 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH12P55289 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH12P55289 C1QBPP1-201ENST00000400117 770 ntBASIC13.8□□□□□ -0.2
CDH12P55289 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH12P55289 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH12P55289 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms