Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
GTF2A1P52655 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.5□□□□□ -0.09
GTF2A1P52655 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 KRT16P4-201ENST00000453883 522 ntBASIC14.5□□□□□ -0.09
GTF2A1P52655 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 NPHS1-202ENST00000378910 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GTF2A1P52655 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GTF2A1P52655 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC14.5□□□□□ -0.09
GTF2A1P52655 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.49□□□□□ -0.09
GTF2A1P52655 OSBP2-208ENST00000437268 3580 ntTSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 U82695.1-201ENST00000635752 1889 ntBASIC14.49□□□□□ -0.09
GTF2A1P52655 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.49□□□□□ -0.09
GTF2A1P52655 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GTF2A1P52655 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
GTF2A1P52655 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.49□□□□□ -0.09
GTF2A1P52655 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.49□□□□□ -0.09
GTF2A1P52655 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.49□□□□□ -0.09
GTF2A1P52655 AC092119.3-201ENST00000612618 583 ntBASIC14.49□□□□□ -0.09
GTF2A1P52655 AP001350.2-201ENST00000625104 1094 ntBASIC14.49□□□□□ -0.09
GTF2A1P52655 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GTF2A1P52655 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.49□□□□□ -0.09
GTF2A1P52655 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GTF2A1P52655 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
GTF2A1P52655 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
GTF2A1P52655 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC14.49□□□□□ -0.09
GTF2A1P52655 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC14.49□□□□□ -0.09
GTF2A1P52655 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GTF2A1P52655 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC14.48□□□□□ -0.09
GTF2A1P52655 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.48□□□□□ -0.09
GTF2A1P52655 AC135782.3-201ENST00000562782 2105 ntBASIC14.48□□□□□ -0.09
GTF2A1P52655 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms