Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SHMT1P1-201ENST00000419974 1312 ntBASIC15.97■□□□□ 0.15
HTTP42858 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.97■□□□□ 0.15
HTTP42858 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.97■□□□□ 0.15
HTTP42858 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HTTP42858 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC15.97■□□□□ 0.15
HTTP42858 AC103563.1-201ENST00000429316 123 ntBASIC15.97■□□□□ 0.15
HTTP42858 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC15.97■□□□□ 0.15
HTTP42858 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.97■□□□□ 0.15
HTTP42858 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
HTTP42858 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.97■□□□□ 0.15
HTTP42858 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.97■□□□□ 0.15
HTTP42858 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HTTP42858 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HTTP42858 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC15.97■□□□□ 0.15
HTTP42858 AC093300.1-201ENST00000510368 1201 ntBASIC15.97■□□□□ 0.15
HTTP42858 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC15.96■□□□□ 0.15
HTTP42858 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.96■□□□□ 0.15
HTTP42858 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HTTP42858 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 MIR1226-201ENST00000408658 75 ntBASIC15.96■□□□□ 0.15
HTTP42858 RNU1-80P-201ENST00000459500 161 ntBASIC15.96■□□□□ 0.15
HTTP42858 TMA16-204ENST00000508268 608 ntTSL 2 BASIC15.96■□□□□ 0.15
HTTP42858 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.96■□□□□ 0.15
HTTP42858 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.96■□□□□ 0.15
HTTP42858 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.96■□□□□ 0.15
HTTP42858 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
HTTP42858 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
HTTP42858 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.96■□□□□ 0.15
HTTP42858 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HTTP42858 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HTTP42858 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC15.96■□□□□ 0.15
HTTP42858 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.96■□□□□ 0.15
HTTP42858 FAM21EP-201ENST00000417804 985 ntBASIC15.96■□□□□ 0.14
HTTP42858 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC15.96■□□□□ 0.14
HTTP42858 AC008494.1-201ENST00000497612 796 ntBASIC15.96■□□□□ 0.14
HTTP42858 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
HTTP42858 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC15.96■□□□□ 0.14
HTTP42858 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
HTTP42858 DBET-201ENST00000630918 3363 ntBASIC15.96■□□□□ 0.14
HTTP42858 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.96■□□□□ 0.14
HTTP42858 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HTTP42858 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 KRT18P44-201ENST00000416086 1285 ntBASIC15.95■□□□□ 0.14
HTTP42858 HNRNPA1P10-201ENST00000444945 962 ntBASIC15.95■□□□□ 0.14
HTTP42858 RN7SL684P-201ENST00000465665 294 ntBASIC15.95■□□□□ 0.14
HTTP42858 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.95■□□□□ 0.14
HTTP42858 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.95■□□□□ 0.14
HTTP42858 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC15.95■□□□□ 0.14
HTTP42858 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC15.95■□□□□ 0.14
HTTP42858 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HTTP42858 MIR4265-201ENST00000582152 99 ntBASIC15.95■□□□□ 0.14
HTTP42858 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.95■□□□□ 0.14
HTTP42858 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.95■□□□□ 0.14
HTTP42858 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC15.95■□□□□ 0.14
HTTP42858 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HTTP42858 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HTTP42858 MAD2L1BP-201ENST00000372171 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 AC008894.3-201ENST00000624324 3103 ntBASIC15.95■□□□□ 0.14
HTTP42858 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 THAP4-203ENST00000402545 833 ntTSL 5 BASIC15.95■□□□□ 0.14
HTTP42858 RPSAP12-201ENST00000435879 888 ntBASIC15.95■□□□□ 0.14
HTTP42858 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 AL136084.1-201ENST00000449172 318 ntBASIC15.95■□□□□ 0.14
HTTP42858 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC15.95■□□□□ 0.14
HTTP42858 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 AC073869.4-201ENST00000620841 800 ntBASIC15.95■□□□□ 0.14
HTTP42858 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC15.95■□□□□ 0.14
HTTP42858 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.95■□□□□ 0.14
HTTP42858 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HTTP42858 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.95■□□□□ 0.14
HTTP42858 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms