Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 AC144522.1-201ENST00000625111 1658 ntBASIC15.25■□□□□ 0.03
SCNN1AP37088 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SCNN1AP37088 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SCNN1AP37088 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.25■□□□□ 0.03
SCNN1AP37088 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.25■□□□□ 0.03
SCNN1AP37088 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.25■□□□□ 0.03
SCNN1AP37088 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.25■□□□□ 0.03
SCNN1AP37088 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.25■□□□□ 0.03
SCNN1AP37088 AC003686.1-201ENST00000550956 1034 ntBASIC15.25■□□□□ 0.03
SCNN1AP37088 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.25■□□□□ 0.03
SCNN1AP37088 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.25■□□□□ 0.03
SCNN1AP37088 BNIP3P13-201ENST00000599968 566 ntBASIC15.25■□□□□ 0.03
SCNN1AP37088 AC005695.3-201ENST00000614522 232 ntBASIC15.25■□□□□ 0.03
SCNN1AP37088 MIR6752-201ENST00000618442 71 ntBASIC15.25■□□□□ 0.03
SCNN1AP37088 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.25■□□□□ 0.03
SCNN1AP37088 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SCNN1AP37088 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.25■□□□□ 0.03
SCNN1AP37088 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.25■□□□□ 0.03
SCNN1AP37088 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SCNN1AP37088 GRK6P1-201ENST00000400595 1711 ntBASIC15.25■□□□□ 0.03
SCNN1AP37088 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SCNN1AP37088 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SCNN1AP37088 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SCNN1AP37088 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SCNN1AP37088 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SCNN1AP37088 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 TUBB8P4-201ENST00000511806 1324 ntBASIC15.24■□□□□ 0.03
SCNN1AP37088 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SCNN1AP37088 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.24■□□□□ 0.03
SCNN1AP37088 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 FAM8A2P-201ENST00000528813 1142 ntBASIC15.24■□□□□ 0.03
SCNN1AP37088 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 AC005730.2-201ENST00000564549 1184 ntBASIC15.24■□□□□ 0.03
SCNN1AP37088 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 AC005962.1-201ENST00000584100 773 ntBASIC15.24■□□□□ 0.03
SCNN1AP37088 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 AC022748.3-201ENST00000621828 275 ntBASIC15.24■□□□□ 0.03
SCNN1AP37088 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.24■□□□□ 0.03
SCNN1AP37088 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.24■□□□□ 0.03
SCNN1AP37088 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 AC027601.5-201ENST00000624065 2482 ntBASIC15.24■□□□□ 0.03
SCNN1AP37088 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.24■□□□□ 0.03
SCNN1AP37088 MYO15B-237ENST00000642007 4893 ntBASIC15.24■□□□□ 0.03
SCNN1AP37088 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SCNN1AP37088 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SCNN1AP37088 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SCNN1AP37088 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.23■□□□□ 0.03
SCNN1AP37088 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.23■□□□□ 0.03
SCNN1AP37088 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCNN1AP37088 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCNN1AP37088 AHCYP4-201ENST00000419201 1315 ntBASIC15.23■□□□□ 0.03
SCNN1AP37088 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCNN1AP37088 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SCNN1AP37088 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SCNN1AP37088 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.23■□□□□ 0.03
SCNN1AP37088 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.23■□□□□ 0.03
SCNN1AP37088 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms