Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC12.69□□□□□ -0.38
CD40P25942 AC103988.2-201ENST00000561804 725 ntBASIC12.69□□□□□ -0.38
CD40P25942 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.69□□□□□ -0.38
CD40P25942 AL606495.2-201ENST00000605867 535 ntBASIC12.69□□□□□ -0.38
CD40P25942 AL021578.1-201ENST00000613646 709 ntBASIC12.69□□□□□ -0.38
CD40P25942 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 AC068587.10-201ENST00000641210 219 ntBASIC12.69□□□□□ -0.38
CD40P25942 AC138627.1-207ENST00000641560 1006 ntBASIC12.69□□□□□ -0.38
CD40P25942 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 AL157791.1-201ENST00000553667 1699 ntBASIC12.69□□□□□ -0.38
CD40P25942 AC144522.1-201ENST00000625111 1658 ntBASIC12.69□□□□□ -0.38
CD40P25942 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 AC018529.2-202ENST00000611482 3087 ntBASIC12.69□□□□□ -0.38
CD40P25942 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.69□□□□□ -0.38
CD40P25942 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.69□□□□□ -0.38
CD40P25942 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CD40P25942 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.69□□□□□ -0.38
CD40P25942 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CD40P25942 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
CD40P25942 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.69□□□□□ -0.38
CD40P25942 KRT8P28-201ENST00000433288 1390 ntBASIC12.69□□□□□ -0.38
CD40P25942 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.68□□□□□ -0.38
CD40P25942 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.68□□□□□ -0.38
CD40P25942 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.68□□□□□ -0.38
CD40P25942 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.68□□□□□ -0.38
CD40P25942 AC006122.1-201ENST00000493323 440 ntBASIC12.68□□□□□ -0.38
CD40P25942 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CD40P25942 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 MIR3619-201ENST00000579667 83 ntBASIC12.68□□□□□ -0.38
CD40P25942 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.68□□□□□ -0.38
CD40P25942 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.68□□□□□ -0.38
CD40P25942 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 AP001505.2-201ENST00000616815 443 ntBASIC12.68□□□□□ -0.38
CD40P25942 AC133540.1-201ENST00000620845 1019 ntBASIC12.68□□□□□ -0.38
CD40P25942 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 NAP1L6-202ENST00000641404 1222 ntBASIC12.68□□□□□ -0.38
CD40P25942 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.68□□□□□ -0.38
CD40P25942 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CD40P25942 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms