Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.78□□□□□ -0.2
PRKCAP17252 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRKCAP17252 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.77□□□□□ -0.2
PRKCAP17252 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCAP17252 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.77□□□□□ -0.2
PRKCAP17252 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCAP17252 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
PRKCAP17252 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCAP17252 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCAP17252 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
PRKCAP17252 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
PRKCAP17252 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PRKCAP17252 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCAP17252 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 NME2P1-201ENST00000426182 414 ntBASIC13.77□□□□□ -0.21
PRKCAP17252 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCAP17252 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.77□□□□□ -0.21
PRKCAP17252 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.77□□□□□ -0.21
PRKCAP17252 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.77□□□□□ -0.21
PRKCAP17252 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCAP17252 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCAP17252 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.77□□□□□ -0.21
PRKCAP17252 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCAP17252 AC089987.1-201ENST00000551654 2209 ntBASIC13.77□□□□□ -0.21
PRKCAP17252 AC005225.4-201ENST00000557330 545 ntBASIC13.77□□□□□ -0.21
PRKCAP17252 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PRKCAP17252 DUX4L47-201ENST00000566374 394 ntBASIC13.77□□□□□ -0.21
PRKCAP17252 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.77□□□□□ -0.21
PRKCAP17252 AC132938.2-201ENST00000579188 680 ntBASIC13.77□□□□□ -0.21
PRKCAP17252 AC015936.2-201ENST00000593177 259 ntBASIC13.77□□□□□ -0.21
PRKCAP17252 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.77□□□□□ -0.21
PRKCAP17252 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PRKCAP17252 IGHV3-72-202ENST00000621503 303 ntBASIC13.77□□□□□ -0.21
PRKCAP17252 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PRKCAP17252 AL603764.1-201ENST00000636452 321 ntBASIC13.77□□□□□ -0.21
PRKCAP17252 AL591163.1-201ENST00000641757 987 ntBASIC13.77□□□□□ -0.21
PRKCAP17252 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.77□□□□□ -0.21
PRKCAP17252 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRKCAP17252 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
PRKCAP17252 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PRKCAP17252 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 INTS4P1-203ENST00000641008 3683 ntBASIC13.76□□□□□ -0.21
PRKCAP17252 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PRKCAP17252 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PRKCAP17252 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
PRKCAP17252 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 EIF3FP3-201ENST00000434851 1086 ntBASIC13.76□□□□□ -0.21
PRKCAP17252 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.76□□□□□ -0.21
PRKCAP17252 TTTY23B-201ENST00000442790 549 ntBASIC13.76□□□□□ -0.21
PRKCAP17252 GIMAP3P-201ENST00000495150 836 ntBASIC13.76□□□□□ -0.21
PRKCAP17252 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.76□□□□□ -0.21
PRKCAP17252 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.76□□□□□ -0.21
PRKCAP17252 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PRKCAP17252 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PRKCAP17252 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.76□□□□□ -0.21
PRKCAP17252 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PRKCAP17252 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms