Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
COX6A1P12074 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.48□□□□□ -0.25
COX6A1P12074 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.48□□□□□ -0.25
COX6A1P12074 OR2K2-202ENST00000374428 1038 ntBASIC13.48□□□□□ -0.25
COX6A1P12074 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 HINT2P1-201ENST00000419438 481 ntBASIC13.48□□□□□ -0.25
COX6A1P12074 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.48□□□□□ -0.25
COX6A1P12074 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.48□□□□□ -0.25
COX6A1P12074 AC026803.1-201ENST00000569130 274 ntBASIC13.48□□□□□ -0.25
COX6A1P12074 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.48□□□□□ -0.25
COX6A1P12074 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.48□□□□□ -0.25
COX6A1P12074 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.48□□□□□ -0.25
COX6A1P12074 MIR6769A-201ENST00000617340 73 ntBASIC13.48□□□□□ -0.25
COX6A1P12074 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.48□□□□□ -0.25
COX6A1P12074 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.48□□□□□ -0.25
COX6A1P12074 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.48□□□□□ -0.25
COX6A1P12074 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
COX6A1P12074 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.48□□□□□ -0.25
COX6A1P12074 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.48□□□□□ -0.25
COX6A1P12074 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COX6A1P12074 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
COX6A1P12074 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COX6A1P12074 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.48□□□□□ -0.25
COX6A1P12074 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COX6A1P12074 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
COX6A1P12074 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
COX6A1P12074 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COX6A1P12074 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.47□□□□□ -0.25
COX6A1P12074 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
COX6A1P12074 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
COX6A1P12074 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COX6A1P12074 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.47□□□□□ -0.25
COX6A1P12074 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.47□□□□□ -0.25
COX6A1P12074 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.47□□□□□ -0.25
COX6A1P12074 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.47□□□□□ -0.25
COX6A1P12074 AC026320.2-201ENST00000434379 478 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.47□□□□□ -0.25
COX6A1P12074 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COX6A1P12074 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.47□□□□□ -0.25
COX6A1P12074 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 RN7SL67P-201ENST00000492147 296 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 AC008723.1-201ENST00000506922 207 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 SORD2P-201ENST00000558556 1069 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.47□□□□□ -0.25
COX6A1P12074 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 RN7SL190P-201ENST00000582519 257 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 LINC01783-202ENST00000614408 828 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 BX284668.2-205ENST00000619677 828 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 AL353726.2-201ENST00000623259 884 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 AC128714.1-201ENST00000637035 887 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
COX6A1P12074 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.47□□□□□ -0.25
COX6A1P12074 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 AGGF1P1-201ENST00000509500 2073 ntBASIC13.47□□□□□ -0.25
COX6A1P12074 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.47□□□□□ -0.25
COX6A1P12074 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.47□□□□□ -0.25
COX6A1P12074 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
COX6A1P12074 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COX6A1P12074 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COX6A1P12074 FAM90A2P-201ENST00000511144 1395 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms