Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.33■□□□□ 0.37
TOP1P11387 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TOP1P11387 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TOP1P11387 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TOP1P11387 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TOP1P11387 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.33■□□□□ 0.37
TOP1P11387 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TOP1P11387 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TOP1P11387 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.33■□□□□ 0.37
TOP1P11387 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.33■□□□□ 0.37
TOP1P11387 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TOP1P11387 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
TOP1P11387 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 KRT8P29-201ENST00000420409 1371 ntBASIC17.33■□□□□ 0.36
TOP1P11387 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 MRPL37P1-201ENST00000592451 1337 ntBASIC17.33■□□□□ 0.36
TOP1P11387 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.33■□□□□ 0.36
TOP1P11387 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.33■□□□□ 0.36
TOP1P11387 KRT8P13-201ENST00000463294 1010 ntBASIC17.33■□□□□ 0.36
TOP1P11387 AC099548.2-209ENST00000480264 625 ntBASIC17.33■□□□□ 0.36
TOP1P11387 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.33■□□□□ 0.36
TOP1P11387 AC100827.2-201ENST00000563214 1194 ntBASIC17.33■□□□□ 0.36
TOP1P11387 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.33■□□□□ 0.36
TOP1P11387 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.33■□□□□ 0.36
TOP1P11387 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 AC132192.2-201ENST00000596206 1147 ntBASIC17.33■□□□□ 0.36
TOP1P11387 AL023803.2-201ENST00000620080 638 ntBASIC17.33■□□□□ 0.36
TOP1P11387 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.33■□□□□ 0.36
TOP1P11387 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TOP1P11387 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TOP1P11387 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.33■□□□□ 0.36
TOP1P11387 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TOP1P11387 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TOP1P11387 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 AL136172.1-201ENST00000598590 1394 ntBASIC17.32■□□□□ 0.36
TOP1P11387 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TOP1P11387 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TOP1P11387 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
TOP1P11387 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 AC021723.1-201ENST00000486306 515 ntBASIC17.32■□□□□ 0.36
TOP1P11387 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.32■□□□□ 0.36
TOP1P11387 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.32■□□□□ 0.36
TOP1P11387 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.32■□□□□ 0.36
TOP1P11387 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TOP1P11387 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
TOP1P11387 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.32■□□□□ 0.36
TOP1P11387 AC244093.1-201ENST00000610837 814 ntBASIC17.32■□□□□ 0.36
TOP1P11387 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.32■□□□□ 0.36
TOP1P11387 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.32■□□□□ 0.36
TOP1P11387 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TOP1P11387 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.32■□□□□ 0.36
TOP1P11387 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TOP1P11387 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TOP1P11387 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms