Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RETP07949 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RETP07949 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.87□□□□□ -0.03
RETP07949 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.87□□□□□ -0.03
RETP07949 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.87□□□□□ -0.03
RETP07949 PIN4P1-201ENST00000451079 396 ntBASIC14.87□□□□□ -0.03
RETP07949 RN7SL67P-201ENST00000492147 296 ntBASIC14.87□□□□□ -0.03
RETP07949 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.87□□□□□ -0.03
RETP07949 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.87□□□□□ -0.03
RETP07949 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.87□□□□□ -0.03
RETP07949 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.87□□□□□ -0.03
RETP07949 AC008805.1-201ENST00000590892 364 ntBASIC14.87□□□□□ -0.03
RETP07949 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC14.87□□□□□ -0.03
RETP07949 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.87□□□□□ -0.03
RETP07949 AC002472.3-201ENST00000640124 621 ntBASIC14.87□□□□□ -0.03
RETP07949 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RETP07949 LINC00552-201ENST00000625151 2579 ntBASIC14.87□□□□□ -0.03
RETP07949 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RETP07949 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.87□□□□□ -0.03
RETP07949 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RETP07949 AC023024.2-201ENST00000623561 1993 ntBASIC14.87□□□□□ -0.03
RETP07949 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RETP07949 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 AL122018.1-201ENST00000446607 2310 ntBASIC14.87□□□□□ -0.03
RETP07949 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RETP07949 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
RETP07949 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.86□□□□□ -0.03
RETP07949 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
RETP07949 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.86□□□□□ -0.03
RETP07949 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RETP07949 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.86□□□□□ -0.03
RETP07949 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
RETP07949 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.86□□□□□ -0.03
RETP07949 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.86□□□□□ -0.03
RETP07949 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.86□□□□□ -0.03
RETP07949 AC012362.1-201ENST00000434906 739 ntBASIC14.86□□□□□ -0.03
RETP07949 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.86□□□□□ -0.03
RETP07949 AC012441.2-201ENST00000444843 739 ntBASIC14.86□□□□□ -0.03
RETP07949 AC008723.1-201ENST00000506922 207 ntBASIC14.86□□□□□ -0.03
RETP07949 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.86□□□□□ -0.03
RETP07949 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.86□□□□□ -0.03
RETP07949 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.86□□□□□ -0.03
RETP07949 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.86□□□□□ -0.03
RETP07949 RBM8B-201ENST00000555532 525 ntBASIC14.86□□□□□ -0.03
RETP07949 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.86□□□□□ -0.03
RETP07949 SAMD11P1-201ENST00000571429 661 ntBASIC14.86□□□□□ -0.03
RETP07949 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.86□□□□□ -0.03
RETP07949 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.86□□□□□ -0.03
RETP07949 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RETP07949 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RETP07949 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.86□□□□□ -0.03
RETP07949 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
RETP07949 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14.86□□□□□ -0.03
RETP07949 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RETP07949 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RETP07949 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 ZBED1P1-201ENST00000502364 1930 ntBASIC14.86□□□□□ -0.03
RETP07949 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC14.86□□□□□ -0.03
RETP07949 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RETP07949 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RETP07949 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RETP07949 SNX18-202ENST00000343017 3140 ntBASIC14.86□□□□□ -0.03
RETP07949 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RETP07949 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.85□□□□□ -0.03
RETP07949 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.85□□□□□ -0.03
RETP07949 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RETP07949 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RETP07949 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms