Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.06■□□□□ 0.16
VTNP04004 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.06■□□□□ 0.16
VTNP04004 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.06■□□□□ 0.16
VTNP04004 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.06■□□□□ 0.16
VTNP04004 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 TBC1D3J-201ENST00000620719 1426 ntBASIC16.06■□□□□ 0.16
VTNP04004 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
VTNP04004 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.06■□□□□ 0.16
VTNP04004 FRMPD2B-201ENST00000431305 1347 ntBASIC16.06■□□□□ 0.16
VTNP04004 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.06■□□□□ 0.16
VTNP04004 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.06■□□□□ 0.16
VTNP04004 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.06■□□□□ 0.16
VTNP04004 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.06■□□□□ 0.16
VTNP04004 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.06■□□□□ 0.16
VTNP04004 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.06■□□□□ 0.16
VTNP04004 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.06■□□□□ 0.16
VTNP04004 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.06■□□□□ 0.16
VTNP04004 RN7SL190P-201ENST00000582519 257 ntBASIC16.06■□□□□ 0.16
VTNP04004 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
VTNP04004 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VTNP04004 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VTNP04004 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.06■□□□□ 0.16
VTNP04004 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 OR2K2-202ENST00000374428 1038 ntBASIC16.05■□□□□ 0.16
VTNP04004 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.05■□□□□ 0.16
VTNP04004 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.05■□□□□ 0.16
VTNP04004 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.05■□□□□ 0.16
VTNP04004 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.05■□□□□ 0.16
VTNP04004 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.05■□□□□ 0.16
VTNP04004 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
VTNP04004 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.05■□□□□ 0.16
VTNP04004 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 AC006453.1-201ENST00000636037 1257 ntBASIC16.05■□□□□ 0.16
VTNP04004 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 CICP14-201ENST00000629111 2732 ntBASIC16.05■□□□□ 0.16
VTNP04004 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.05■□□□□ 0.16
VTNP04004 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.05■□□□□ 0.16
VTNP04004 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VTNP04004 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.04■□□□□ 0.16
VTNP04004 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.04■□□□□ 0.16
VTNP04004 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.04■□□□□ 0.16
VTNP04004 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VTNP04004 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VTNP04004 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VTNP04004 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
VTNP04004 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VTNP04004 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VTNP04004 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VTNP04004 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.04■□□□□ 0.16
VTNP04004 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VTNP04004 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms