Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14□□□□□ -0.17
MT-ND1P03886 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14□□□□□ -0.17
MT-ND1P03886 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
MT-ND1P03886 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.99□□□□□ -0.17
MT-ND1P03886 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
MT-ND1P03886 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.99□□□□□ -0.17
MT-ND1P03886 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.99□□□□□ -0.17
MT-ND1P03886 AC092580.3-201ENST00000430932 139 ntBASIC13.99□□□□□ -0.17
MT-ND1P03886 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.99□□□□□ -0.17
MT-ND1P03886 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.99□□□□□ -0.17
MT-ND1P03886 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.99□□□□□ -0.17
MT-ND1P03886 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 TMEM198B-204ENST00000484016 896 ntBASIC13.99□□□□□ -0.17
MT-ND1P03886 TIMM17BP1-201ENST00000545713 516 ntBASIC13.99□□□□□ -0.17
MT-ND1P03886 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.99□□□□□ -0.17
MT-ND1P03886 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.99□□□□□ -0.17
MT-ND1P03886 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.99□□□□□ -0.17
MT-ND1P03886 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.99□□□□□ -0.17
MT-ND1P03886 AC000095.1-201ENST00000603208 874 ntBASIC13.99□□□□□ -0.17
MT-ND1P03886 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 AL844908.2-201ENST00000609461 460 ntBASIC13.99□□□□□ -0.17
MT-ND1P03886 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.99□□□□□ -0.17
MT-ND1P03886 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.99□□□□□ -0.17
MT-ND1P03886 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
MT-ND1P03886 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
MT-ND1P03886 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.99□□□□□ -0.17
MT-ND1P03886 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
MT-ND1P03886 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
MT-ND1P03886 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
MT-ND1P03886 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
MT-ND1P03886 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 AL445209.1-201ENST00000607269 3491 ntBASIC13.98□□□□□ -0.17
MT-ND1P03886 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.98□□□□□ -0.17
MT-ND1P03886 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 AL158070.2-201ENST00000623713 1621 ntBASIC13.98□□□□□ -0.17
MT-ND1P03886 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
MT-ND1P03886 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
MT-ND1P03886 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.98□□□□□ -0.17
MT-ND1P03886 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
MT-ND1P03886 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.98□□□□□ -0.17
MT-ND1P03886 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.98□□□□□ -0.17
MT-ND1P03886 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 FAM86GP-201ENST00000448322 971 ntBASIC13.98□□□□□ -0.17
MT-ND1P03886 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.98□□□□□ -0.17
MT-ND1P03886 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.98□□□□□ -0.17
MT-ND1P03886 AC097493.3-201ENST00000509725 367 ntBASIC13.98□□□□□ -0.17
MT-ND1P03886 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.98□□□□□ -0.17
MT-ND1P03886 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
MT-ND1P03886 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.98□□□□□ -0.17
MT-ND1P03886 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
MT-ND1P03886 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.98□□□□□ -0.17
MT-ND1P03886 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
MT-ND1P03886 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.98□□□□□ -0.17
MT-ND1P03886 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.98□□□□□ -0.17
MT-ND1P03886 AC011498.7-201ENST00000624986 2027 ntBASIC13.98□□□□□ -0.17
MT-ND1P03886 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MT-ND1P03886 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MT-ND1P03886 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.98□□□□□ -0.17
MT-ND1P03886 C8orf49-201ENST00000525043 1968 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms