Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
HLA-DQA1P01909 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 NCLP1-201ENST00000445357 1963 ntBASIC11.16□□□□□ -0.62
HLA-DQA1P01909 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 MIR940-201ENST00000401276 94 ntBASIC11.16□□□□□ -0.62
HLA-DQA1P01909 FDX1P1-201ENST00000449115 551 ntBASIC11.16□□□□□ -0.62
HLA-DQA1P01909 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 RNA5SP416-201ENST00000516838 111 ntBASIC11.16□□□□□ -0.62
HLA-DQA1P01909 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 AC018845.2-201ENST00000568326 409 ntBASIC11.16□□□□□ -0.62
HLA-DQA1P01909 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 OR7E47P-204ENST00000575924 449 ntBASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 AP000437.1-201ENST00000624057 2085 ntBASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
HLA-DQA1P01909 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 BCAR1-209ENST00000546196 1340 ntBASIC11.15□□□□□ -0.62
HLA-DQA1P01909 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 SLC25A1P1-201ENST00000528351 927 ntBASIC11.15□□□□□ -0.62
HLA-DQA1P01909 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AC023141.13-201ENST00000604991 943 ntBASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AC026979.3-201ENST00000607315 403 ntBASIC11.15□□□□□ -0.62
HLA-DQA1P01909 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AC007064.4-201ENST00000637740 555 ntBASIC11.15□□□□□ -0.62
HLA-DQA1P01909 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.15□□□□□ -0.62
HLA-DQA1P01909 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms