Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 AC015818.8-201ENST00000587907 1519 ntBASIC15.83■□□□□ 0.12
HLA-DRAP01903 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DRAP01903 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DRAP01903 AC090505.1-201ENST00000430515 1834 ntBASIC15.82■□□□□ 0.12
HLA-DRAP01903 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.82■□□□□ 0.12
HLA-DRAP01903 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 MTX1P1-201ENST00000440904 838 ntBASIC15.82■□□□□ 0.12
HLA-DRAP01903 Z93015.1-201ENST00000451718 390 ntBASIC15.82■□□□□ 0.12
HLA-DRAP01903 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 RPSAP36-202ENST00000494591 1261 ntBASIC15.82■□□□□ 0.12
HLA-DRAP01903 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 SORD2P-201ENST00000558556 1069 ntBASIC15.82■□□□□ 0.12
HLA-DRAP01903 MIR6074-201ENST00000612054 107 ntBASIC15.82■□□□□ 0.12
HLA-DRAP01903 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 AC009093.10-201ENST00000641956 1442 ntBASIC15.82■□□□□ 0.12
HLA-DRAP01903 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 AC011498.7-201ENST00000624986 2027 ntBASIC15.82■□□□□ 0.12
HLA-DRAP01903 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DRAP01903 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DRAP01903 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 AL354877.1-201ENST00000424412 413 ntBASIC15.81■□□□□ 0.12
HLA-DRAP01903 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 AC244394.1-201ENST00000435000 1665 ntBASIC15.81■□□□□ 0.12
HLA-DRAP01903 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 FAM86HP-204ENST00000513466 959 ntBASIC15.81■□□□□ 0.12
HLA-DRAP01903 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 AC012617.1-204ENST00000586340 2305 ntBASIC15.81■□□□□ 0.12
HLA-DRAP01903 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DRAP01903 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DRAP01903 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms