Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.52□□□□□ -0.08
CPNE6O95741 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.52□□□□□ -0.08
CPNE6O95741 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.52□□□□□ -0.08
CPNE6O95741 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
CPNE6O95741 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.52□□□□□ -0.08
CPNE6O95741 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CPNE6O95741 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CPNE6O95741 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CPNE6O95741 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CPNE6O95741 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
CPNE6O95741 GHSR-202ENST00000427970 912 ntBASIC14.52□□□□□ -0.09
CPNE6O95741 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE6O95741 AC005077.2-201ENST00000449786 690 ntBASIC14.52□□□□□ -0.09
CPNE6O95741 SERPINA13P-202ENST00000478994 924 ntBASIC14.52□□□□□ -0.09
CPNE6O95741 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.52□□□□□ -0.09
CPNE6O95741 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.52□□□□□ -0.09
CPNE6O95741 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.52□□□□□ -0.09
CPNE6O95741 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE6O95741 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.52□□□□□ -0.09
CPNE6O95741 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CPNE6O95741 AL451050.2-201ENST00000606967 682 ntBASIC14.52□□□□□ -0.09
CPNE6O95741 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.52□□□□□ -0.09
CPNE6O95741 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CPNE6O95741 AC067930.6-201ENST00000623257 4947 ntBASIC14.52□□□□□ -0.09
CPNE6O95741 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.52□□□□□ -0.09
CPNE6O95741 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.52□□□□□ -0.09
CPNE6O95741 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
CPNE6O95741 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 CICP11-201ENST00000434745 2827 ntBASIC14.51□□□□□ -0.09
CPNE6O95741 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE6O95741 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CPNE6O95741 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE6O95741 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 AL157414.3-201ENST00000624276 1954 ntBASIC14.51□□□□□ -0.09
CPNE6O95741 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
CPNE6O95741 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.51□□□□□ -0.09
CPNE6O95741 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CPNE6O95741 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE6O95741 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 AL354877.1-201ENST00000424412 413 ntBASIC14.51□□□□□ -0.09
CPNE6O95741 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE6O95741 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.51□□□□□ -0.09
CPNE6O95741 AC026434.2-201ENST00000506094 1078 ntBASIC14.51□□□□□ -0.09
CPNE6O95741 AC100850.1-201ENST00000506768 649 ntBASIC14.51□□□□□ -0.09
CPNE6O95741 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.51□□□□□ -0.09
CPNE6O95741 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE6O95741 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.51□□□□□ -0.09
CPNE6O95741 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.51□□□□□ -0.09
CPNE6O95741 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.51□□□□□ -0.09
CPNE6O95741 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 NDUFV2P1-201ENST00000596415 907 ntBASIC14.51□□□□□ -0.09
CPNE6O95741 AC004466.1-201ENST00000599515 1080 ntBASIC14.51□□□□□ -0.09
CPNE6O95741 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.51□□□□□ -0.09
CPNE6O95741 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CPNE6O95741 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 AC138649.2-201ENST00000615886 705 ntBASIC14.51□□□□□ -0.09
CPNE6O95741 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.51□□□□□ -0.09
CPNE6O95741 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CPNE6O95741 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CPNE6O95741 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CPNE6O95741 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CPNE6O95741 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms