Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.59■□□□□ 0.09
RTN3O95197 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN3O95197 AC009955.4-201ENST00000597192 544 ntBASIC15.59■□□□□ 0.09
RTN3O95197 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RTN3O95197 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN3O95197 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN3O95197 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN3O95197 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN3O95197 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTN3O95197 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTN3O95197 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN3O95197 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.59■□□□□ 0.09
RTN3O95197 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.59■□□□□ 0.09
RTN3O95197 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RTN3O95197 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RTN3O95197 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN3O95197 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN3O95197 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTN3O95197 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.58■□□□□ 0.09
RTN3O95197 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN3O95197 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN3O95197 AC018735.1-201ENST00000437208 1502 ntBASIC15.58■□□□□ 0.09
RTN3O95197 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
RTN3O95197 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN3O95197 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RTN3O95197 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RTN3O95197 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN3O95197 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN3O95197 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN3O95197 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.58■□□□□ 0.08
RTN3O95197 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.58■□□□□ 0.08
RTN3O95197 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.58■□□□□ 0.08
RTN3O95197 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.58■□□□□ 0.08
RTN3O95197 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.58■□□□□ 0.08
RTN3O95197 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.58■□□□□ 0.08
RTN3O95197 PUDPP3-201ENST00000445368 636 ntBASIC15.58■□□□□ 0.08
RTN3O95197 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTN3O95197 SERPINA13P-202ENST00000478994 924 ntBASIC15.58■□□□□ 0.08
RTN3O95197 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.58■□□□□ 0.08
RTN3O95197 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTN3O95197 MIR3615-201ENST00000581999 87 ntBASIC15.58■□□□□ 0.08
RTN3O95197 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.58■□□□□ 0.08
RTN3O95197 AL162426.1-201ENST00000624141 743 ntBASIC15.58■□□□□ 0.08
RTN3O95197 AC244452.3-201ENST00000636814 210 ntBASIC15.58■□□□□ 0.08
RTN3O95197 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RTN3O95197 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
RTN3O95197 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTN3O95197 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.58■□□□□ 0.08
RTN3O95197 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RTN3O95197 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN3O95197 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RTN3O95197 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RTN3O95197 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.58■□□□□ 0.08
RTN3O95197 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN3O95197 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN3O95197 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RTN3O95197 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.57■□□□□ 0.08
RTN3O95197 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RTN3O95197 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RTN3O95197 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RTN3O95197 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RTN3O95197 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 AL035414.1-201ENST00000451327 857 ntBASIC15.57■□□□□ 0.08
RTN3O95197 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.57■□□□□ 0.08
RTN3O95197 ZNF767P-206ENST00000513792 565 ntBASIC15.57■□□□□ 0.08
RTN3O95197 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.57■□□□□ 0.08
RTN3O95197 AC132192.2-201ENST00000596206 1147 ntBASIC15.57■□□□□ 0.08
RTN3O95197 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.57■□□□□ 0.08
RTN3O95197 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.57■□□□□ 0.08
RTN3O95197 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 E2F3P2-201ENST00000447755 1422 ntBASIC15.57■□□□□ 0.08
RTN3O95197 AL356585.2-201ENST00000625078 2396 ntBASIC15.57■□□□□ 0.08
RTN3O95197 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RTN3O95197 AC005912.2-201ENST00000619492 2400 ntBASIC15.57■□□□□ 0.08
RTN3O95197 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RTN3O95197 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN3O95197 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RTN3O95197 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.57■□□□□ 0.08
RTN3O95197 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RTN3O95197 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.56■□□□□ 0.08
RTN3O95197 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms