Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 SARS-202ENST00000369923 1882 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 AC015813.5-201ENST00000624641 1514 ntBASIC6.36□□□□□ -1.39
USH2AO75445 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC6.35□□□□□ -1.39
USH2AO75445 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC6.35□□□□□ -1.39
USH2AO75445 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 RN7SL832P-201ENST00000607781 1756 ntBASIC6.35□□□□□ -1.39
USH2AO75445 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC6.35□□□□□ -1.39
USH2AO75445 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 AC138392.1-201ENST00000427577 921 ntBASIC6.35□□□□□ -1.39
USH2AO75445 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 RBM14-205ENST00000443702 732 ntTSL 3 BASIC6.35□□□□□ -1.39
USH2AO75445 GOLGA2P10-201ENST00000550961 817 ntBASIC6.35□□□□□ -1.39
USH2AO75445 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC6.35□□□□□ -1.39
USH2AO75445 NT5C-204ENST00000578337 582 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 AL009176.1-201ENST00000607876 650 ntBASIC6.35□□□□□ -1.39
USH2AO75445 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 AC117503.4-201ENST00000623229 1418 ntBASIC6.35□□□□□ -1.39
USH2AO75445 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC6.35□□□□□ -1.39
USH2AO75445 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC6.35□□□□□ -1.39
USH2AO75445 RPL18AP16-201ENST00000424057 531 ntBASIC6.35□□□□□ -1.39
USH2AO75445 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC6.35□□□□□ -1.39
USH2AO75445 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC6.35□□□□□ -1.39
USH2AO75445 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC6.35□□□□□ -1.39
USH2AO75445 VPS18-202ENST00000558474 873 ntTSL 3 BASIC6.35□□□□□ -1.39
USH2AO75445 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC6.35□□□□□ -1.39
USH2AO75445 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC6.35□□□□□ -1.39
USH2AO75445 MIR7704-201ENST00000610524 59 ntBASIC6.35□□□□□ -1.39
USH2AO75445 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC6.35□□□□□ -1.39
USH2AO75445 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
USH2AO75445 AL136172.1-201ENST00000598590 1394 ntBASIC6.35□□□□□ -1.39
USH2AO75445 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 AC232323.1-201ENST00000540724 2099 ntBASIC6.35□□□□□ -1.39
USH2AO75445 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC6.35□□□□□ -1.39
USH2AO75445 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
USH2AO75445 AC084018.2-201ENST00000613093 2607 ntBASIC6.35□□□□□ -1.39
USH2AO75445 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
USH2AO75445 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 AL359092.2-201ENST00000423330 585 ntBASIC6.35□□□□□ -1.39
USH2AO75445 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 VDAC1P11-201ENST00000458323 852 ntBASIC6.35□□□□□ -1.39
USH2AO75445 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC6.35□□□□□ -1.39
USH2AO75445 TEKT4P2-202ENST00000559466 1312 ntBASIC6.35□□□□□ -1.39
USH2AO75445 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 NAT9-204ENST00000578822 839 ntTSL 3 BASIC6.35□□□□□ -1.39
USH2AO75445 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC6.35□□□□□ -1.39
USH2AO75445 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USH2AO75445 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
USH2AO75445 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC6.35□□□□□ -1.39
USH2AO75445 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
USH2AO75445 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
USH2AO75445 KRT8P38-201ENST00000441370 1430 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms