Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.02■□□□□ -0
PMPCBO75439 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PMPCBO75439 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PMPCBO75439 AC063926.2-201ENST00000623766 1308 ntBASIC15.02■□□□□ -0
PMPCBO75439 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.02■□□□□ -0
PMPCBO75439 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 AC006001.1-201ENST00000325130 474 ntBASIC15.02■□□□□ -0
PMPCBO75439 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 AC004945.1-201ENST00000416738 983 ntBASIC15.02■□□□□ -0
PMPCBO75439 CD8B2-202ENST00000417670 633 ntBASIC15.02■□□□□ -0
PMPCBO75439 ARSEP1-201ENST00000420443 635 ntBASIC15.02■□□□□ -0
PMPCBO75439 U91328.1-201ENST00000437528 223 ntBASIC15.02■□□□□ -0
PMPCBO75439 RPL7P3-201ENST00000441388 714 ntBASIC15.02■□□□□ -0
PMPCBO75439 AC234783.1-201ENST00000441761 496 ntBASIC15.02■□□□□ -0
PMPCBO75439 COX5BP1-201ENST00000507622 393 ntBASIC15.02■□□□□ -0
PMPCBO75439 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.02■□□□□ -0
PMPCBO75439 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.02■□□□□ -0
PMPCBO75439 RAB43P1-201ENST00000561790 589 ntBASIC15.02■□□□□ -0
PMPCBO75439 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.02■□□□□ -0
PMPCBO75439 AL512343.1-201ENST00000605837 169 ntBASIC15.02■□□□□ -0
PMPCBO75439 AL162274.1-201ENST00000617191 1098 ntBASIC15.02■□□□□ -0
PMPCBO75439 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.02■□□□□ -0
PMPCBO75439 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.02■□□□□ -0
PMPCBO75439 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.02□□□□□ -0.01
PMPCBO75439 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.02□□□□□ -0.01
PMPCBO75439 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
PMPCBO75439 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PMPCBO75439 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.02□□□□□ -0.01
PMPCBO75439 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
PMPCBO75439 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.02□□□□□ -0.01
PMPCBO75439 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PMPCBO75439 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
PMPCBO75439 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.01□□□□□ -0.01
PMPCBO75439 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
PMPCBO75439 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.01□□□□□ -0.01
PMPCBO75439 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.01□□□□□ -0.01
PMPCBO75439 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.01□□□□□ -0.01
PMPCBO75439 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.01□□□□□ -0.01
PMPCBO75439 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.01□□□□□ -0.01
PMPCBO75439 CTBP2P5-201ENST00000454986 1264 ntBASIC15.01□□□□□ -0.01
PMPCBO75439 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.01□□□□□ -0.01
PMPCBO75439 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.01□□□□□ -0.01
PMPCBO75439 AC073413.1-201ENST00000603927 732 ntBASIC15.01□□□□□ -0.01
PMPCBO75439 RHOXF1P1-202ENST00000635473 501 ntBASIC15.01□□□□□ -0.01
PMPCBO75439 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.01□□□□□ -0.01
PMPCBO75439 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.01□□□□□ -0.01
PMPCBO75439 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.01□□□□□ -0.01
PMPCBO75439 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.01□□□□□ -0.01
PMPCBO75439 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PMPCBO75439 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PMPCBO75439 AC006504.5-208ENST00000588784 2401 ntBASIC15.01□□□□□ -0.01
PMPCBO75439 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PMPCBO75439 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PMPCBO75439 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PMPCBO75439 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15□□□□□ -0.01
PMPCBO75439 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms