Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 AC074386.1-202ENST00000463561 864 ntBASIC14.76□□□□□ -0.05
SHOX2O60902 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.76□□□□□ -0.05
SHOX2O60902 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.76□□□□□ -0.05
SHOX2O60902 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.76□□□□□ -0.05
SHOX2O60902 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.76□□□□□ -0.05
SHOX2O60902 AL662844.1-201ENST00000546340 181 ntBASIC14.76□□□□□ -0.05
SHOX2O60902 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SHOX2O60902 AC092865.6-201ENST00000642101 219 ntBASIC14.76□□□□□ -0.05
SHOX2O60902 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SHOX2O60902 Z97205.2-201ENST00000564697 1639 ntBASIC14.76□□□□□ -0.05
SHOX2O60902 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
SHOX2O60902 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.76□□□□□ -0.05
SHOX2O60902 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.76□□□□□ -0.05
SHOX2O60902 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.76□□□□□ -0.05
SHOX2O60902 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHOX2O60902 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC14.75□□□□□ -0.05
SHOX2O60902 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SHOX2O60902 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SHOX2O60902 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SHOX2O60902 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.75□□□□□ -0.05
SHOX2O60902 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.75□□□□□ -0.05
SHOX2O60902 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 LINC01165-201ENST00000445190 1623 ntBASIC14.75□□□□□ -0.05
SHOX2O60902 AC015688.4-201ENST00000580780 1647 ntBASIC14.75□□□□□ -0.05
SHOX2O60902 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
SHOX2O60902 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.75□□□□□ -0.05
SHOX2O60902 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.75□□□□□ -0.05
SHOX2O60902 RPL13AP23-201ENST00000480739 586 ntBASIC14.75□□□□□ -0.05
SHOX2O60902 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.75□□□□□ -0.05
SHOX2O60902 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.75□□□□□ -0.05
SHOX2O60902 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.75□□□□□ -0.05
SHOX2O60902 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.75□□□□□ -0.05
SHOX2O60902 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SHOX2O60902 AP000842.3-202ENST00000569238 1080 ntBASIC14.75□□□□□ -0.05
SHOX2O60902 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.75□□□□□ -0.05
SHOX2O60902 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.75□□□□□ -0.05
SHOX2O60902 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
SHOX2O60902 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 PCDHB17P-202ENST00000623466 3066 ntBASIC14.75□□□□□ -0.05
SHOX2O60902 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.75□□□□□ -0.05
SHOX2O60902 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SHOX2O60902 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
SHOX2O60902 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHOX2O60902 MSNP1-201ENST00000511640 1732 ntBASIC14.75□□□□□ -0.05
SHOX2O60902 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.74□□□□□ -0.05
SHOX2O60902 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.74□□□□□ -0.05
SHOX2O60902 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SHOX2O60902 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.74□□□□□ -0.05
SHOX2O60902 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SHOX2O60902 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.74□□□□□ -0.05
SHOX2O60902 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC14.74□□□□□ -0.05
SHOX2O60902 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SHOX2O60902 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.74□□□□□ -0.05
SHOX2O60902 AC015922.1-201ENST00000421102 1152 ntBASIC14.74□□□□□ -0.05
SHOX2O60902 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
SHOX2O60902 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.74□□□□□ -0.05
SHOX2O60902 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
SHOX2O60902 KRT126P-201ENST00000549467 1181 ntBASIC14.74□□□□□ -0.05
SHOX2O60902 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms